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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • nucleus 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, plastid, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular, nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os05t0104700-01 Rice extracellular 72.86 61.6
Os05t0104200-01 Rice extracellular 46.9 51.46
TraesCS2B01G493200.1 Wheat endoplasmic reticulum, extracellular 48.67 48.25
HORVU2Hr1G106620.1 Barley extracellular 48.38 48.24
TraesCS2D01G470400.1 Wheat extracellular 48.38 47.95
TraesCS2D01G470500.1 Wheat extracellular, vacuole 48.08 47.52
Os05t0104150-01 Rice extracellular 47.49 47.08
TraesCS2A01G470500.1 Wheat extracellular 46.9 46.49
Bra005918.1-P Field mustard extracellular 28.02 46.34
TraesCS2B01G493300.1 Wheat extracellular 46.9 46.09
TraesCS2A01G470600.1 Wheat extracellular 45.43 45.56
CDY58887 Canola extracellular 41.89 43.03
GSMUA_Achr9P12430_001 Banana extracellular 37.76 42.38
CDY58884 Canola extracellular 41.3 42.3
Bra009234.1-P Field mustard extracellular 41.0 41.99
Bra005919.1-P Field mustard extracellular 41.0 41.99
Bra009237.1-P Field mustard extracellular 41.59 41.96
CDX70057 Canola extracellular 41.59 41.96
CDX70058 Canola extracellular 41.3 41.92
CDX70060 Canola extracellular 41.0 41.87
CDX98967 Canola extracellular 41.3 41.67
AT5G06860.1 Thale cress extracellular 40.41 41.52
CDX98965 Canola extracellular 40.41 41.27
Bra009236.1-P Field mustard extracellular 40.41 41.02
Bra009238.1-P Field mustard extracellular 40.12 40.96
AT5G06870.1 Thale cress extracellular 39.82 40.91
CDY58888 Canola extracellular 41.0 40.64
Bra005917.1-P Field mustard extracellular 41.0 40.64
CDX98966 Canola extracellular 39.82 40.42
CDX81023 Canola extracellular 40.71 40.35
Os07t0568700-02 Rice extracellular 39.23 40.06
CDX70059 Canola extracellular 39.23 39.82
Bra005916.1-P Field mustard extracellular 40.71 39.77
VIT_13s0064g01370.t01 Wine grape extracellular 38.94 39.76
Bra009235.1-P Field mustard extracellular 38.94 39.52
CDY58889 Canola extracellular 40.12 39.19
KRH12977 Soybean nucleus 38.94 38.94
KRG95348 Soybean mitochondrion 39.53 38.18
Solyc09g014480.1.1 Tomato extracellular 37.46 37.91
PGSC0003DMT400021883 Potato extracellular 36.58 37.13
Os09t0491612-01 Rice extracellular 36.58 36.26
Solyc09g014590.2.1 Tomato extracellular 33.33 36.22
CDX98968 Canola endoplasmic reticulum, extracellular, vacuole 40.71 35.84
KRH12976 Soybean cytosol 38.94 35.48
CDX70056 Canola extracellular 40.12 33.58
Os03t0436600-00 Rice endoplasmic reticulum 30.68 31.61
Os08t0505900-01 Rice extracellular 31.56 28.16
CDX81022 Canola extracellular, plasma membrane 35.69 23.91
Os04t0677200-01 Rice cytosol, peroxisome 22.71 17.62
Os05t0104650-00 Rice plasma membrane 20.35 4.88
Protein Annotations
EnsemblPlants:Os05t0104600-01EnsemblPlantsGene:Os05g0104600Gene3D:3.80.10.10InterPro:IPR032675InterPro:LRR_N_plant-typInterPro:LRR_dom_sf
PANTHER:PTHR44138PFAM:PF08263PFscan:PS51257ProteinID:AAS88837.1ProteinID:BAF16317.1ProteinID:BAS91856.1
ProteinID:EEE62019.1SEG:segSignalP:SignalP-noTMSUPFAM:SSF52058UniParc:UPI0000358513UniProt:Q75M20
MapMan:26.8.3.4:::::
Description
POLYGALACTURONASE-INHIBITING PROTEIN 3Leucine-rich repeat (LRR) protein, Inhibitor of fungal polygalacturonase, Defence response (Os05t0104600-01)
Coordinates
chr5:+:248400..249419
Molecular Weight (calculated)
36140.4 Da
IEP (calculated)
6.379
GRAVY (calculated)
0.181
Length
339 amino acids
Sequence
(BLAST)
001: MARAVVLLLL AVAALSCTSA AASGPSCHAD DSAALLAVKA AFNNASFEYW TPEFPCCDWY GVDCGDDYLP SDDRVINLAI TRDDNITGTI PGDAIAGLTR
101: LRYITFFKVP GITGPIPAAL ANISGLRVLT ISHTAVSGPI PSFIGDKFTD LGILDLSFNS LTGAIPASLA KPPKLNSIDL SRNRLTGSIP RLLLSKAGQQ
201: AFLTMSHNNL TGRIPAEFGA VNFVQIDLSR NQLTGDASML FGSGKKELVS AYLSRNALSF NMSQLQLPEE LNFLDVSHNS IYGSIPAQMA NMTDMQLLNV
301: SYNRLCGVVP TGGNMPSFDA YCFQHNKCLC GAPLSHCTH
Best Arabidopsis Sequence Match ( AT5G06860.1 )
(BLAST)
001: MDKTATLCLL FLFTFLTTCL SKDLCNQNDK NTLLKIKKSL NNPYHLASWD PQTDCCSWYC LECGDATVNH RVTALTIFSG QISGQIPAEV GDLPYLETLV
101: FRKLSNLTGT IQPTIAKLKN LRMLRLSWTN LTGPIPDFIS QLKNLEFLEL SFNDLSGSIP SSLSTLPKIL ALELSRNKLT GSIPESFGSF PGTVPDLRLS
201: HNQLSGPIPK SLGNIDFNRI DLSRNKLQGD ASMLFGSNKT TWSIDLSRNM FQFDISKVDI PKTLGILDLN HNGITGNIPV QWTEAPLQFF NVSYNKLCGH
301: IPTGGKLQTF DSYSYFHNKC LCGAPLEICK
Arabidopsis Description
PGIP1PGIP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UBN4]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.