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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 10
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G266200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 68.71 74.13
TraesCS5B01G265900.1 Wheat extracellular 72.51 70.25
HORVU5Hr1G073500.1 Barley extracellular, vacuole 70.76 69.14
Zm00001d020944_P001 Maize extracellular 67.84 68.04
EER99094 Sorghum mitochondrion, vacuole 68.71 66.95
GSMUA_Achr6P22250_001 Banana extracellular 50.29 52.44
Os07t0568700-02 Rice extracellular 44.44 45.78
Os05t0104200-01 Rice extracellular 37.43 41.42
Os05t0104150-01 Rice extracellular 39.47 39.47
Os05t0104600-01 Rice extracellular 36.26 36.58
Os03t0436600-00 Rice endoplasmic reticulum 31.29 32.52
Os05t0104700-01 Rice extracellular 37.43 31.92
Os08t0505900-01 Rice extracellular 33.04 29.74
Os04t0677200-01 Rice cytosol, peroxisome 25.15 19.68
Os05t0104650-00 Rice plasma membrane 20.18 4.88
Protein Annotations
EntrezGene:107278071MapMan:26.8.3.4Gene3D:3.80.10.10UniProt:B9G4A7ProteinID:BAT08736.1ProteinID:EEE69955.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488
GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310
GO:GO:0016740GO:GO:0019538InterPro:IPR001611InterPro:IPR032675InterPro:LRR_N_plant-typInterPro:LRR_dom_sf
InterPro:Leu-rich_rptEnsemblPlantsGene:Os09g0491612EnsemblPlants:Os09t0491612-01PFAM:PF08263PFAM:PF13516PFAM:PF13855
PANTHER:PTHR44138PANTHER:PTHR44138:SF2SUPFAM:SSF52058SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000193500C
RefSeq:XP_015612367.1SEG:seg::::
Description
POLYGALACTURONASE-INHIBITING PROTEIN 7Leucine-rich repeat (LRR) protein, Inhibitor of fungal polygalacturonase, Defence response (Os09t0491612-01)
Coordinates
chr9:-:18950233..18951277
Molecular Weight (calculated)
35885.3 Da
IEP (calculated)
6.331
GRAVY (calculated)
0.265
Length
342 amino acids
Sequence
(BLAST)
001: MANATVVASS WIPLLCLVVV VLSACTAVSS AVECNGDDRA ALLRVKAQLG DPVRLSSWRP STNCCAWEPA VFCSGEPGRV TGLALFSLAG VAAPVPPALG
101: ELTGLAVLQI ASVRGMSGPI PPSFANLSLL EDLDITGTSI SGPVPASYLA GATNLRTLVI ADSRLAGPIP PSLAGDHPNL RYLDLSGNFL TGAIPPGLVH
201: GSFRFLILSH NQLTGEIPRC YGDVDTVDLS HNRLTGDPSP HLFGIAAPAA KIDLSWNELA FDMTGVRFPH HLRYLDLSHN RITGKVAKSL MDVRLEHLNV
301: SDNELCGEIP AGRFMAAHGA DCYARNRCLC GAPLPPCCDG GL
Best Arabidopsis Sequence Match ( AT3G12145.1 )
(BLAST)
001: MKLFVHLSIF FSILFITLPS SYSCTENDKN ALLQIKKALG NPPLLSSWNP RTDCCTGWTG VECTNRRVTG LSVTSGEVSG QISYQIGDLV DLRTLDFSYL
101: PHLTGNIPRT ITKLKNLNTL YLKHTSLSGP IPDYISELKS LTFLDLSFNQ FTGPIPGSLS QMPKLEAIQI NDNKLTGSIP NSFGSFVGNV PNLYLSNNKL
201: SGKIPESLSK YDFNAVDLSG NGFEGDAFMF FGRNKTTVRV DLSRNMFNFD LVKVKFARSI VSLDLSQNHI YGKIPPALTK LHLEHFNVSD NHLCGKIPSG
301: GLLQTFEPSA FAHNICLCGT PLKAC
Arabidopsis Description
FLR1FTM4 [Source:UniProtKB/TrEMBL;Acc:A0A178V9V7]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.