Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g111450.2.1 | Tomato | plastid | 78.91 | 40.56 |
| Solyc02g070510.2.1 | Tomato | nucleus | 39.84 | 21.52 |
| Solyc08g016510.2.1 | Tomato | extracellular | 39.84 | 21.52 |
| Solyc07g055080.2.1 | Tomato | cytosol, endoplasmic reticulum | 35.16 | 19.15 |
| Solyc10g008010.2.1 | Tomato | extracellular, plastid | 34.38 | 18.72 |
| Solyc02g081700.1.1 | Tomato | extracellular | 33.59 | 17.34 |
| Solyc12g009140.1.1 | Tomato | extracellular | 28.12 | 14.63 |
| Solyc04g080590.2.1 | Tomato | extracellular | 32.81 | 14.19 |
| Solyc10g077030.1.1 | Tomato | extracellular | 23.44 | 12.05 |
| Solyc10g081130.1.1 | Tomato | extracellular, plastid | 23.44 | 12.05 |
Protein Annotations
| Gene3D:3.60.20.10 | MapMan:50.3.4 | GO:GO:0000502 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004298 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005839 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0019773 | GO:GO:0051603 | InterPro:IPR023332 | InterPro:IPR029055 | UniProt:K4B408 |
| InterPro:Ntn_hydrolases_N | PFAM:PF00227 | PFscan:PS51475 | PANTHER:PTHR11599 | PANTHER:PTHR11599:SF106 | InterPro:Proteasome_alpha-type |
| InterPro:Proteasome_sua/b | SUPFAM:SSF56235 | EnsemblPlantsGene:Solyc01g111460.2 | EnsemblPlants:Solyc01g111460.2.1 | MEROPS:T01.978 | UniParc:UPI0002767702 |
Description
Proteasome endopeptidase complex [Source:UniProtKB/TrEMBL;Acc:K4B408]
Coordinates
chr1:-:97692030..97693718
Molecular Weight (calculated)
14222.1 Da
IEP (calculated)
7.451
GRAVY (calculated)
-0.096
Length
128 amino acids
Sequence
(BLAST)
(BLAST)
001: MRCTIMYFFY DVLECWEKMR ISEIVNLDDH IALVCAGLKA DALVLVNKTR IECQSHRHTV EDPVTVEYIT RYIAGLQQKN TQSGGVRPFG LSTLIIGFDP
101: HTGVPSLYKT DPSGTFSAPK ANAAGRNS
101: HTGVPSLYKT DPSGTFSAPK ANAAGRNS
001: MARYDRAITV FSPDGHLFQV EYALEAVRKG NAAVGVRGTD TVVLAVEKKS TPKLQDSRSA RKIVSLDNHI ALACAGLKAD ARVLINKARI ECQSHRLTLE
101: DPVTVEYITR YIAGLQQKYT QSGGVRPFGL STLIVGFDPY TRIPALYQTD PSGTFSAWKA NATGRNSNSI REFLEKNYKE SAGQETVKLA IRALLEVVES
201: GGKNIEVAVM TREEGVLKQL EEEEIDIIVA EIEAEKAAAE AAKKGPAKET
101: DPVTVEYITR YIAGLQQKYT QSGGVRPFGL STLIVGFDPY TRIPALYQTD PSGTFSAWKA NATGRNSNSI REFLEKNYKE SAGQETVKLA IRALLEVVES
201: GGKNIEVAVM TREEGVLKQL EEEEIDIIVA EIEAEKAAAE AAKKGPAKET
Arabidopsis Description
PAD1Proteasome endopeptidase complex [Source:UniProtKB/TrEMBL;Acc:A0A178VPE4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.