Factsheet for TraesCS1B01G129800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G107700.1	Wheat	mitochondrion	93.21	94.06
TraesCS1D01G111400.1	Wheat	mitochondrion	92.31	92.31
Zm00001d034946_P001	Maize	mitochondrion	48.42	63.69
Zm00001d034947_P001	Maize	mitochondrion	48.42	63.69
Zm00001d034945_P001	Maize	mitochondrion, nucleus	47.51	61.4
OQU91224	Sorghum	mitochondrion, nucleus	49.32	57.67
Os05t0162800-00	Rice	mitochondrion, nucleus	52.04	55.83
TraesCS3B01G151500.1	Wheat	nucleus	49.32	38.11
GSMUA_Achr3P17770_001	Banana	nucleus	29.41	27.2
TraesCS6B01G266800.3	Wheat	nucleus	34.84	26.92
TraesCS7B01G372500.1	Wheat	nucleus	35.75	23.17
TraesCS6B01G288500.1	Wheat	nucleus	24.89	12.28
TraesCS7B01G478200.1	Wheat	nucleus	25.79	11.8
TraesCS2B01G478700.1	Wheat	nucleus	21.27	11.33
TraesCS7B01G188000.1	Wheat	nucleus	26.24	7.84

Protein Annotations

EnsemblPlants:TraesCS1B01G129800.1	EnsemblPlantsGene:TraesCS1B01G129800	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	InterPro:SANT/Myb
PANTHER:PTHR12802	PANTHER:PTHR12802:SF55	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	TIGR:cd00167	TIGRFAMs:TIGR01557	MapMan:15.5.2.2	:	:

Description

No Description!

Coordinates

chr1B:-:160308639..160310019

Molecular Weight (calculated)

24596.7 Da

IEP (calculated)

9.724

GRAVY (calculated)

-0.274

Length

221 amino acids

Sequence
(BLAST)

001: MATMVRGARM PAAARSSAVG RNKKLRKPYT ITRPRERWTD EEHERFLHAL HIFGRDWKSI EALVATKTSV QIRSHAQKHF LKAQKLGLGA CLPPPLHPRR
101: AAALRQQPPA HSHPDADMLV PSVDWACAPP ESRWPDLDAP GAREWPSAGA LHLQDETVEL PLSPHDLRFA LVYRFVGDVF ASHAAVPVDA QLQRLQLQGV
201: DPVVVDTILV VLRNLEANLC A

Best Arabidopsis Sequence Match ( AT5G52660.2 )
(BLAST)

001: MVSRNSDGYF LDPTGMTVPG LGPSFTAAVS SSSSPTTSST AVAVADVTAM VSSSEEDLSK KIRKPYTITK SRESWTEPEH DKFLEALQLF DRDWKKIEAF
101: IGSKTVIQIR SHAQKYFLKV QKSGTGEHLP PPRPKRKAAH PYPQKAHKNV QLQVPGSFKS TSEPNDPSFM FRPESSSMLM TSPTTAAAAP WTNNAQTISF
201: TPLPKAGAGA NNNCSSSSEN TPRPRSNRDA RDHGNVGHSL RVLPDFAQVY GFIGSVFDPY ASNHLQKLKK MDPIDVETVL LLMRNLSINL SSPDFEDHRR
301: LLSSYDIGSE TATDHGGVNK TLNKDPPEIS T

Arabidopsis Description

RVE6Protein REVEILLE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0W3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.