Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G134000.1 | Wheat | nucleus | 91.61 | 87.92 |
| TraesCS3A01G308500.1 | Wheat | nucleus | 90.91 | 87.25 |
| Os01t0156000-01 | Rice | nucleus | 65.38 | 61.11 |
| Zm00001d015487_P001 | Maize | nucleus | 16.43 | 60.26 |
| HORVU3Hr1G025030.1 | Barley | nucleus | 89.86 | 59.91 |
| Zm00001d023295_P001 | Maize | nucleus | 19.23 | 57.89 |
| Zm00001d039785_P001 | Maize | nucleus | 55.24 | 56.23 |
| Zm00001d032105_P001 | Maize | plastid | 23.43 | 52.76 |
| Zm00001d044969_P001 | Maize | cytosol | 16.78 | 51.06 |
| TraesCS1B01G129800.1 | Wheat | mitochondrion | 38.11 | 49.32 |
| Zm00001d012051_P001 | Maize | plastid | 22.73 | 47.79 |
| OQU86282 | Sorghum | nucleus | 62.24 | 45.99 |
| Zm00001d011020_P001 | Maize | extracellular | 27.27 | 38.42 |
| GSMUA_Achr3P17770_001 | Banana | nucleus | 29.37 | 35.15 |
| TraesCS6B01G266800.3 | Wheat | nucleus | 32.87 | 32.87 |
| TraesCS7B01G372500.1 | Wheat | nucleus | 32.17 | 26.98 |
| TraesCS6B01G288500.1 | Wheat | nucleus | 21.68 | 13.84 |
| TraesCS2B01G478700.1 | Wheat | nucleus | 19.93 | 13.73 |
| TraesCS7B01G478200.1 | Wheat | nucleus | 22.38 | 13.25 |
| TraesCS7B01G188000.1 | Wheat | nucleus | 22.03 | 8.51 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G151500.1 | EnsemblPlantsGene:TraesCS3B01G151500 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | InterPro:SANT/Myb |
| PANTHER:PTHR12802 | PANTHER:PTHR12802:SF85 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | TIGR:cd00167 | TIGRFAMs:TIGR01557 | MapMan:15.5.2.2 | : | : |
Description
No Description!
Coordinates
chr3B:-:143159494..143160933
Molecular Weight (calculated)
31038.4 Da
IEP (calculated)
6.681
GRAVY (calculated)
-0.547
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MAERGGSGEG SSSSPGKKAR KPYTITRPRE RWCPEEHERF LDALLRFGRD WKKIEEHVRT KTAVQIRSHA QKYFLKVQRL GLAAGLPPPQ HPSRRLALSR
101: QQTSPADGTA VLHGQPQHYP TGAVQDSIGW SFPGPGNLPA SSDMQNLDWA GSSGTSAWVS HGGAGSQTEP SASTHPGGSS FMGTPSFDDT GMDWTGTGST
201: GEASAIADAE DETIPLPLSP DDMHFARVYR FIGDIFDPAT PCRIEAHLQK LKDMDGITVK TILLVLRNLE TNLTAPQFEP IVSDLL
101: QQTSPADGTA VLHGQPQHYP TGAVQDSIGW SFPGPGNLPA SSDMQNLDWA GSSGTSAWVS HGGAGSQTEP SASTHPGGSS FMGTPSFDDT GMDWTGTGST
201: GEASAIADAE DETIPLPLSP DDMHFARVYR FIGDIFDPAT PCRIEAHLQK LKDMDGITVK TILLVLRNLE TNLTAPQFEP IVSDLL
001: MSSSPSRNPT NAEAPPPPPT STDAVAEGSS KKVRKPYTIT KSRESWTEEE HDKFLEALQL FDRDWKKIED FVGSKTVIQI RSHAQKYFLK VQKNGTLAHV
101: PPPRPKRKAA HPYPQKASKN AQMPLQVSTS FTTTRNGDMP GYASWDDASM LLNRVISPQH ELATLRGAEA DIGSKGLLNV SSPSTSGMGS SSRTVSGSEI
201: VRKAKQPPVL HGVPDFAEVY NFIGSVFDPE TRGHVEKLKE MDPINFETVL LLMRNLTVNL SNPDLESTVS VKFAIKDL
101: PPPRPKRKAA HPYPQKASKN AQMPLQVSTS FTTTRNGDMP GYASWDDASM LLNRVISPQH ELATLRGAEA DIGSKGLLNV SSPSTSGMGS SSRTVSGSEI
201: VRKAKQPPVL HGVPDFAEVY NFIGSVFDPE TRGHVEKLKE MDPINFETVL LLMRNLTVNL SNPDLESTVS VKFAIKDL
Arabidopsis Description
RVE8Protein REVEILLE 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.