Factsheet for GSMUA_Achr3P17770_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
extracellular 1
plasma membrane 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015487_P001	Maize	nucleus	17.57	53.85
Zm00001d023295_P001	Maize	nucleus	16.74	42.11
GSMUA_Achr7P04620_001	Banana	nucleus	38.08	34.08
Zm00001d044969_P001	Maize	cytosol	13.39	34.04
Zm00001d034947_P001	Maize	mitochondrion	23.43	33.33
Zm00001d034946_P001	Maize	mitochondrion	23.43	33.33
GSMUA_Achr5P10280_001	Banana	nucleus	35.98	31.62
Zm00001d034945_P001	Maize	mitochondrion, nucleus	22.18	30.99
Zm00001d039785_P001	Maize	nucleus	35.56	30.25
Os05t0162800-00	Rice	mitochondrion, nucleus	25.94	30.1
Zm00001d032105_P001	Maize	plastid	15.9	29.92
TraesCS1A01G107700.1	Wheat	mitochondrion	27.2	29.68
OQU91224	Sorghum	mitochondrion, nucleus	23.43	29.63
TraesCS1B01G129800.1	Wheat	mitochondrion	27.2	29.41
TraesCS3B01G151500.1	Wheat	nucleus	35.15	29.37
GSMUA_Achr7P17560_001	Banana	nucleus	36.82	29.33
TraesCS3D01G134000.1	Wheat	nucleus	36.4	29.19
TraesCS3A01G308500.1	Wheat	nucleus	36.4	29.19
Os01t0156000-01	Rice	nucleus	37.24	29.09
TraesCS1D01G111400.1	Wheat	mitochondrion	26.78	28.96
GSMUA_Achr10P...	Banana	nucleus	9.62	27.38
Zm00001d012051_P001	Maize	plastid	15.48	27.21
GSMUA_Achr1P15370_001	Banana	mitochondrion	13.39	26.23
GSMUA_Achr1P03720_001	Banana	nucleus	35.15	24.42
Zm00001d011020_P001	Maize	extracellular	20.08	23.65
OQU86282	Sorghum	nucleus	37.24	23.0
GSMUA_Achr1P06480_001	Banana	plastid	38.49	21.4
HORVU3Hr1G025030.1	Barley	nucleus	35.98	20.05
GSMUA_Achr8P13440_001	Banana	nucleus	18.41	11.61
GSMUA_Achr11P...	Banana	nucleus	19.25	9.62
GSMUA_AchrUn_...	Banana	nucleus	17.57	8.99
GSMUA_AchrUn_...	Banana	nucleus	18.41	7.32
GSMUA_Achr1P06360_001	Banana	nucleus	18.41	6.06
GSMUA_Achr10P...	Banana	nucleus	10.88	4.3

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	MapMan:27.1.6.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:GSMUA_Achr3G17770_001	EnsemblPlants:GSMUA_Achr3P17770_001	EnsemblPlants:GSMUA_Achr3T17770_001	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M0SFJ3
InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF81
InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI00029582B0	:	:

Description

Putative Myb-like protein G [Source:GMGC_GENE;Acc:GSMUA_Achr3G17770_001]

Coordinates

chr3:-:19279610..19283527

Molecular Weight (calculated)

26715.9 Da

IEP (calculated)

8.757

GRAVY (calculated)

-0.248

Length

239 amino acids

Sequence
(BLAST)

001: MIYGYEKFGR DWKKIEEFVG TKTTIQIRSH AQKYFLKVQK IGLAAHVPPP HPKRKMAHPT QQINPNNAIV SVDCLYASSR ILPACSVWDN TSNDVNYTPS
101: EATSLPACYT ISPDIEGDSG IFGKTSIYSQ NIDWSGNLSG SLLTHRATKQ RNPHPDFAQV YTFIGSMFDP NITWRAEHFF EKLQDVDPVT AKIILILMRN
201: LAVNLTSPSL EPLIRWLGTY DVNTRKVAAI GGTAAFADI

Best Arabidopsis Sequence Match ( AT3G09600.1 )
(BLAST)

001: MSSSPSRNPT NAEAPPPPPT STDAVAEGSS KKVRKPYTIT KSRESWTEEE HDKFLEALQL FDRDWKKIED FVGSKTVIQI RSHAQKYFLK VQKNGTLAHV
101: PPPRPKRKAA HPYPQKASKN AQMPLQVSTS FTTTRNGDMP GYASWDDASM LLNRVISPQH ELATLRGAEA DIGSKGLLNV SSPSTSGMGS SSRTVSGSEI
201: VRKAKQPPVL HGVPDFAEVY NFIGSVFDPE TRGHVEKLKE MDPINFETVL LLMRNLTVNL SNPDLESTRK VLLSYDNVTT ELPSVVSLVK NSTSDKSA

Arabidopsis Description

RVE8Protein REVEILLE 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.