Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d034946_P001 | Maize | mitochondrion | 74.07 | 83.33 |
| Zm00001d034947_P001 | Maize | mitochondrion | 74.07 | 83.33 |
| Zm00001d034945_P001 | Maize | mitochondrion, nucleus | 74.07 | 81.87 |
| Os05t0162800-00 | Rice | mitochondrion, nucleus | 56.61 | 51.94 |
| TraesCS1A01G107700.1 | Wheat | mitochondrion | 59.26 | 51.14 |
| TraesCS1B01G129800.1 | Wheat | mitochondrion | 57.67 | 49.32 |
| TraesCS1D01G111400.1 | Wheat | mitochondrion | 56.61 | 48.42 |
| KXG31009 | Sorghum | nucleus | 36.51 | 24.56 |
| OQU86282 | Sorghum | nucleus | 49.21 | 24.03 |
| GSMUA_Achr3P17770_001 | Banana | nucleus | 29.63 | 23.43 |
| KXG20579 | Sorghum | nucleus | 36.51 | 20.35 |
| EER89043 | Sorghum | nucleus | 33.33 | 19.87 |
| EES05718 | Sorghum | nucleus | 27.51 | 11.43 |
| EES12724 | Sorghum | nucleus | 24.87 | 10.61 |
| KXG20957 | Sorghum | nucleus | 24.34 | 10.6 |
| EES13385 | Sorghum | nucleus | 30.16 | 7.63 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.2 | EntrezGene:8056747 | UniProt:A0A1Z5S5N0 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | EnsemblPlants:OQU91224 |
| ProteinID:OQU91224 | ProteinID:OQU91224.1 | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR12802 | PANTHER:PTHR12802:SF55 |
| InterPro:SANT/Myb | SMART:SM00717 | EnsemblPlantsGene:SORBI_3001G143100 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0001A82A89 |
| RefSeq:XP_002466695.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:11470536..11472221
Molecular Weight (calculated)
20463.5 Da
IEP (calculated)
10.724
GRAVY (calculated)
-0.298
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAAKSSAG TAVKKCRKPY VMTRPRERWT ADEHDRFLHA LLLFGRDWKR VQAFVATKTG TQIRSHAQKH FLRAEKKLGL AAAAAAAAPH PRTSAGAGAG
101: PGHRQQRPLS TGWCADDDGA SAPDVETVRL PLSPDDLRFA QVYRFVGDVF GSGAPRPVEA QLHRLLGADP VIVDTILRVL ANLQDNLSL
101: PGHRQQRPLS TGWCADDDGA SAPDVETVRL PLSPDDLRFA QVYRFVGDVF GSGAPRPVEA QLHRLLGADP VIVDTILRVL ANLQDNLSL
001: MVTVNPSQAH CLPMKMSLPG FNTLPHTATT IPVSIRSNRT MSFFEDPTKK VRKPYTITKS RENWTEQEHD KFLEALHLFD RDWKKIKAFV GSKTVIQIRS
101: HAQKYFLKVQ KNGTKEHLPP PRPKRKANHP YPQKAPKFTL SSSNALFQHD YLYNTNSHPV ISTTRKHGLV HCDVSIPSSV IKEEFGVSEN CCSTSSSRDK
201: QRTRIVTETN DQESCGKPHR VAPNFAEVYN FIGSVFDPKT TGHVKRLKEM DPINLETVLL LMKNLSVNLT SPEFDEQRKL ISSYNAS
101: HAQKYFLKVQ KNGTKEHLPP PRPKRKANHP YPQKAPKFTL SSSNALFQHD YLYNTNSHPV ISTTRKHGLV HCDVSIPSSV IKEEFGVSEN CCSTSSSRDK
201: QRTRIVTETN DQESCGKPHR VAPNFAEVYN FIGSVFDPKT TGHVKRLKEM DPINLETVLL LMKNLSVNLT SPEFDEQRKL ISSYNAS
Arabidopsis Description
ASG4 [Source:UniProtKB/TrEMBL;Acc:A0A178W835]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.