Factsheet for Zm00001d034945_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

mitochondrion 4
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034947_P001	Maize	mitochondrion	82.46	83.93
Zm00001d034946_P001	Maize	mitochondrion	82.46	83.93
OQU91224	Sorghum	mitochondrion, nucleus	81.87	74.07
TraesCS1A01G107700.1	Wheat	mitochondrion	63.16	49.32
TraesCS1B01G129800.1	Wheat	mitochondrion	61.4	47.51
TraesCS1D01G111400.1	Wheat	mitochondrion	61.4	47.51
Zm00001d024547_P001	Maize	peroxisome	15.79	45.0
Os05t0162800-00	Rice	mitochondrion, nucleus	53.8	44.66
Zm00001d015487_P001	Maize	nucleus	18.13	39.74
Zm00001d023295_P001	Maize	nucleus	18.13	32.63
Zm00001d044969_P001	Maize	cytosol	16.37	29.79
Zm00001d039785_P001	Maize	nucleus	46.78	28.47
Zm00001d017609_P011	Maize	nucleus	39.18	24.54
Zm00001d012051_P001	Maize	plastid	19.3	24.26
Zm00001d032105_P001	Maize	plastid	17.54	23.62
GSMUA_Achr3P17770_001	Banana	nucleus	30.99	22.18
Zm00001d045581_P002	Maize	nucleus	36.84	19.94
Zm00001d046974_P002	Maize	nucleus	38.6	19.58
Zm00001d036632_P002	Maize	nucleus	39.18	18.66
Zm00001d011020_P001	Maize	extracellular	21.05	17.73
Zm00001d051480_P001	Maize	nucleus	28.66	12.41
Zm00001d014863_P002	Maize	nucleus	30.41	12.04
Zm00001d026017_P001	Maize	nucleus	29.82	11.26
Zm00001d017642_P001	Maize	nucleus	29.82	10.92
Zm00001d002545_P002	Maize	nucleus	28.07	10.91
Zm00001d049543_P003	Maize	nucleus	29.24	6.94
Zm00001d024546_P001	Maize	nucleus	11.7	3.02

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100278975	MapMan:15.5.2.2	ProteinID:AIB05755.1	UniProt:B6UG21	EMBL:EU976186
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom
InterPro:Myb_dom_plants	ProteinID:ONM11885.1	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF55
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000182F1AB	EnsemblPlantsGene:Zm00001d034945
EnsemblPlants:Zm00001d034945_P001	EnsemblPlants:Zm00001d034945_T001	SEG:seg	:	:	:

Description

MYB-related-transcription factor 45Protein REVEILLE 8

Coordinates

chr1:-:306362055..306362570

Molecular Weight (calculated)

18707.6 Da

IEP (calculated)

10.358

GRAVY (calculated)

-0.187

Length

171 amino acids

Sequence
(BLAST)

001: MAAAAVKSSA GMAGKKSRKP YVVSRPREKW TADEHGRFLH ALLLFGRDWK RVQAFVATKT GTQIRSHAQK HFLRADKKLG LAVPPRHPHR SAAGCPAWCA
101: DDGGTLAPDV ETVQFPLSPD DLRLAQVYRF VGDVLGSSVE AQLHRLLGAD PVVVDTVLRV LANLQDNLDI L

Best Arabidopsis Sequence Match ( AT3G09600.1 )
(BLAST)

001: MSSSPSRNPT NAEAPPPPPT STDAVAEGSS KKVRKPYTIT KSRESWTEEE HDKFLEALQL FDRDWKKIED FVGSKTVIQI RSHAQKYFLK VQKNGTLAHV
101: PPPRPKRKAA HPYPQKASKN AQMPLQVSTS FTTTRNGDMP GYASWDDASM LLNRVISPQH ELATLRGAEA DIGSKGLLNV SSPSTSGMGS SSRTVSGSEI
201: VRKAKQPPVL HGVPDFAEVY NFIGSVFDPE TRGHVEKLKE MDPINFETVL LLMRNLTVNL SNPDLESTRK VLLSYDNVTT ELPSVVSLVK NSTSDKSA

Arabidopsis Description

RVE8Protein REVEILLE 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.