Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG20579 | Sorghum | nucleus | 74.93 | 79.35 |
| Zm00001d046974_P002 | Maize | nucleus | 73.82 | 78.64 |
| Os06t0669700-01 | Rice | nucleus | 48.75 | 70.85 |
| TraesCS7B01G372500.1 | Wheat | nucleus | 62.95 | 66.28 |
| Zm00001d024547_P001 | Maize | peroxisome | 10.03 | 60.0 |
| Zm00001d017609_P011 | Maize | nucleus | 44.29 | 58.24 |
| GSMUA_Achr7P17560_001 | Banana | nucleus | 45.68 | 54.67 |
| Zm00001d045581_P002 | Maize | nucleus | 46.24 | 52.53 |
| KRH08856 | Soybean | nucleus | 43.45 | 51.83 |
| KRH35235 | Soybean | nucleus | 44.57 | 51.28 |
| Solyc06g036300.2.1 | Tomato | nucleus, plastid | 42.9 | 51.16 |
| PGSC0003DMT400074344 | Potato | plastid | 39.55 | 49.13 |
| Bra029111.1-P | Field mustard | nucleus | 43.73 | 49.06 |
| VIT_16s0050g01180.t01 | Wine grape | nucleus | 45.96 | 48.96 |
| KRG91589 | Soybean | nucleus | 44.85 | 48.94 |
| Bra003117.1-P | Field mustard | nucleus | 41.5 | 48.69 |
| CDY52837 | Canola | nucleus | 41.5 | 48.69 |
| CDY56155 | Canola | nucleus | 43.73 | 48.61 |
| Zm00001d015487_P001 | Maize | nucleus | 10.31 | 47.44 |
| AT5G52660.2 | Thale cress | nucleus | 43.45 | 47.13 |
| CDY51831 | Canola | vacuole | 44.01 | 45.4 |
| CDY27841 | Canola | nucleus | 35.93 | 45.1 |
| KRH38371 | Soybean | nucleus | 42.9 | 43.63 |
| Zm00001d034947_P001 | Maize | mitochondrion | 18.66 | 39.88 |
| Zm00001d034946_P001 | Maize | mitochondrion | 18.66 | 39.88 |
| Zm00001d034945_P001 | Maize | mitochondrion, nucleus | 18.66 | 39.18 |
| Zm00001d023295_P001 | Maize | nucleus | 10.03 | 37.89 |
| Zm00001d039785_P001 | Maize | nucleus | 25.07 | 32.03 |
| Zm00001d044969_P001 | Maize | cytosol | 8.08 | 30.85 |
| Zm00001d032105_P001 | Maize | plastid | 9.75 | 27.56 |
| Zm00001d012051_P001 | Maize | plastid | 9.75 | 25.74 |
| Zm00001d011020_P001 | Maize | extracellular | 11.42 | 20.2 |
| Zm00001d051480_P001 | Maize | nucleus | 20.61 | 18.73 |
| Zm00001d014863_P002 | Maize | nucleus | 20.89 | 17.36 |
| Zm00001d002545_P002 | Maize | nucleus | 20.89 | 17.05 |
| Zm00001d026017_P001 | Maize | nucleus | 20.06 | 15.89 |
| Zm00001d017642_P001 | Maize | nucleus | 20.61 | 15.85 |
| Zm00001d049543_P003 | Maize | nucleus | 21.45 | 10.69 |
| Zm00001d024546_P001 | Maize | nucleus | 10.03 | 5.43 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100283068 | MapMan:15.5.2.2 | MapMan:27.1.6.2 | UniProt:A0A1D6LQ20 | ProteinID:AQK81586.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom |
| InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR12802 | PANTHER:PTHR12802:SF85 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0008449D58 | EnsemblPlantsGene:Zm00001d036632 | EnsemblPlants:Zm00001d036632_P002 |
| EnsemblPlants:Zm00001d036632_T002 | SEG:seg | : | : | : | : |
Description
MYB-related-transcription factor 77Protein REVEILLE 6
Coordinates
chr6:-:95752346..95758209
Molecular Weight (calculated)
39461.3 Da
IEP (calculated)
8.772
GRAVY (calculated)
-0.372
Length
359 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSMSTTPKP LDSAVVSAAV DGGDEGGGGG GGGKKQAHGA VMAPPPMVVP AAAPAAEEEV RKVRKPYTIT KSRESWTEPE HDKFLEALQL FDRDWKKIEA
101: YVGSKTVIQI RSHAQKYFLK VQKNGTGEHL PPPRPKRKAA HPYPQKASKN VSQAILSQEQ PTQREQGSVM PMDTATVRNT NANVAVPSWD NTLAQPFSAG
201: HVQGAAATNN CSSSMESPSG TWPTSEAVEQ ENMVPPLRAM PDFAQVYNFL GSIFDPDTSG HLQRLKAMDP VDIETALLLM RNLSMNLRSP DFEQHLLVMY
301: KHAINDILFW VISGGCYHHI AMVARTMSNL KPWKILDLLR VAIFHPCKPS VTLHVHMWS
101: YVGSKTVIQI RSHAQKYFLK VQKNGTGEHL PPPRPKRKAA HPYPQKASKN VSQAILSQEQ PTQREQGSVM PMDTATVRNT NANVAVPSWD NTLAQPFSAG
201: HVQGAAATNN CSSSMESPSG TWPTSEAVEQ ENMVPPLRAM PDFAQVYNFL GSIFDPDTSG HLQRLKAMDP VDIETALLLM RNLSMNLRSP DFEQHLLVMY
301: KHAINDILFW VISGGCYHHI AMVARTMSNL KPWKILDLLR VAIFHPCKPS VTLHVHMWS
001: MSSSPSRNPT NAEAPPPPPT STDAVAEGSS KKVRKPYTIT KSRESWTEEE HDKFLEALQL FDRDWKKIED FVGSKTVIQI RSHAQKYFLK VQKNGTLAHV
101: PPPRPKRKAA HPYPQKASKN AQMPLQVSTS FTTTRNGDMP GYASWDDASM LLNRVISPQH ELATLRGAEA DIGSKGLLNV SSPSTSGMGS SSRTVSGSEI
201: VRKAKQPPVL HGVPDFAEVY NFIGSVFDPE TRGHVEKLKE MDPINFETVL LLMRNLTVNL SNPDLESTVS VKFAIKDL
101: PPPRPKRKAA HPYPQKASKN AQMPLQVSTS FTTTRNGDMP GYASWDDASM LLNRVISPQH ELATLRGAEA DIGSKGLLNV SSPSTSGMGS SSRTVSGSEI
201: VRKAKQPPVL HGVPDFAEVY NFIGSVFDPE TRGHVEKLKE MDPINFETVL LLMRNLTVNL SNPDLESTVS VKFAIKDL
Arabidopsis Description
RVE8Protein REVEILLE 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.