CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, peroxisome, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35235	Soybean	nucleus	85.41	90.06
KRH08856	Soybean	nucleus	70.21	76.74
KRH38371	Soybean	nucleus	70.21	65.44
VIT_16s0050g01180.t01	Wine grape	nucleus	64.13	62.61
HORVU6Hr1G066000.1	Barley	nucleus	53.5	62.19
Solyc06g036300.2.1	Tomato	nucleus, plastid	56.84	62.13
KXG31009	Sorghum	nucleus	52.28	61.21
TraesCS6D01G239800.1	Wheat	nucleus	53.19	61.19
TraesCS6B01G266800.3	Wheat	nucleus	53.19	61.19
Bra003117.1-P	Field mustard	nucleus	56.53	60.78
CDY52837	Canola	nucleus	56.53	60.78
Os02t0680700-01	Rice	nucleus	52.89	59.79
Zm00001d017609_P011	Maize	nucleus	49.54	59.71
Bra029111.1-P	Field mustard	nucleus	58.05	59.69
GSMUA_Achr5P10280_001	Banana	nucleus	48.94	59.19
CDY56155	Canola	nucleus	58.05	59.13
AT5G52660.2	Thale cress	nucleus	58.05	57.7
GSMUA_Achr7P17560_001	Banana	nucleus	52.58	57.67
PGSC0003DMT400074344	Potato	plastid	50.46	57.44
CDY27841	Canola	nucleus	49.85	57.34
KRH06589	Soybean	nucleus	57.75	57.23
KRH40382	Soybean	nucleus	49.85	57.14
KRH48063	Soybean	nucleus	56.53	56.19
CDY51831	Canola	vacuole	58.36	55.17
KRH00849	Soybean	nucleus	50.76	54.22
HORVU0Hr1G031850.1	Barley	nucleus, plastid	53.5	52.85
Os06t0105800-02	Rice	nucleus	47.11	52.01
Os06t0669700-01	Rice	nucleus	38.6	51.42
KRH32383	Soybean	plastid	45.9	51.36
HORVU7Hr1G001830.3	Barley	nucleus	41.95	50.92
TraesCS6A01G258600.2	Wheat	nucleus	52.89	50.88
KRG95914	Soybean	nucleus	44.38	50.52
KXG20579	Sorghum	nucleus	51.98	50.44
TraesCS7D01G014900.2	Wheat	nucleus	43.16	50.18
TraesCS7A01G017600.1	Wheat	nucleus	42.25	50.0
EER89043	Sorghum	nucleus	48.02	49.84
KRH19794	Soybean	nucleus	45.59	49.83
TraesCS7D01G458000.1	Wheat	nucleus	50.76	48.97
TraesCS7A01G470700.1	Wheat	nucleus	50.46	48.82
TraesCS7B01G372500.1	Wheat	nucleus	50.46	48.68
KRH67632	Soybean	nucleus	44.07	48.49
TraesCS4A01G474100.2	Wheat	nucleus	44.38	47.25
Zm00001d046974_P002	Maize	nucleus	48.33	47.18
Zm00001d045581_P002	Maize	nucleus	44.98	46.84
Zm00001d036632_P002	Maize	nucleus	48.94	44.85
GSMUA_Achr1P03720_001	Banana	nucleus	45.59	43.6
GSMUA_Achr1P06480_001	Banana	plastid	56.23	43.02
HORVU7Hr1G107550.3	Barley	nucleus	50.46	39.24
GSMUA_Achr1P15370_001	Banana	mitochondrion	13.37	36.07
KRH20042	Soybean	nucleus	22.19	25.44
KRG98008	Soybean	nucleus	22.49	20.5
KRH17280	Soybean	nucleus	24.92	18.81
KRH72927	Soybean	nucleus	24.32	18.35
KRH09476	Soybean	nucleus	23.71	16.35
KRH38938	Soybean	nucleus	23.1	16.31
KRH68974	Soybean	nucleus	25.53	11.23
KRH06339	Soybean	nucleus	24.01	10.53
KRH47757	Soybean	nucleus	23.4	10.27
KRG97259	Soybean	nucleus, plastid	24.92	10.01

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	MapMan:27.1.6.2	EntrezGene:778166	UniProt:A0A0R0EDA6	EMBL:ACUP02012692
EnsemblPlantsGene:GLYMA_20G162800	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	EnsemblPlants:KRG91589
ProteinID:KRG91589	ProteinID:KRG91589.1	InterPro:Myb_dom_plants	PFAM:PF00249	PANTHER:PTHR12802	PANTHER:PTHR12802:SF83
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI0003DE90D1	SEG:seg

Description

hypothetical protein

Coordinates

chr20:-:40035090..40040593

Molecular Weight (calculated)

36814.6 Da

IEP (calculated)

9.425

GRAVY (calculated)

-0.560

Length

329 amino acids

Sequence
(BLAST)

001: MVSKNPNPSE AFYLDPSGMS LPGILPFAAA ATATADSFED PAKKTRKPYT ITKSRESWTE PEHDKFLEAL QLGENQKEIG QFFILFEVFS LDAESDRFDR
101: DWKKIEAFVG SKTVIQIRSH AQKYFLKVQK SGTNEHLPPP RPKRKAAHPY PQKASKTAPV LSQVSGSFQS SSALLEPGYI LKHDSSAMPK TPIINTAVSS
201: WSNNSLQKTT SVLHGQKQKV NNCCSSSRSP RAQLVGESNG QRNNSHPLRV LPDFAEVYSF IGSVFDPNVT GHVQKLKRMD PIDVETVLLL MRNLSINLAS
301: PDFEDHRRLL ASYEVEPEVD KYKCRLNHA

Best Arabidopsis Sequence Match ( AT1G01520.1 )
(BLAST)

001: MVTVNPSQAH CLPMKMSLPG FNTLPHTATT IPVSIRSNRT MSFFEDPTKK VRKPYTITKS RENWTEQEHD KFLEALHLFD RDWKKIKAFV GSKTVIQIRS
101: HAQKYFLKVQ KNGTKEHLPP PRPKRKANHP YPQKAPKFTL SSSNALFQHD YLYNTNSHPV ISTTRKHGLV HCDVSIPSSV IKEEFGVSEN CCSTSSSRDK
201: QRTRIVTETN DQESCGKPHR VAPNFAEVYN FIGSVFDPKT TGHVKRLKEM DPINLETVLL LMKNLSVNLT SPEFDEQRKL ISSYNAS

Arabidopsis Description

ASG4 [Source:UniProtKB/TrEMBL;Acc:A0A178W835]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.