CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG91589	Soybean	nucleus	90.06	85.41
KRH08856	Soybean	nucleus	74.04	76.74
KRH38371	Soybean	nucleus	74.04	65.44
HORVU6Hr1G066000.1	Barley	nucleus	56.73	62.54
VIT_16s0050g01180.t01	Wine grape	nucleus	66.99	62.02
KXG31009	Sorghum	nucleus	55.77	61.92
TraesCS6D01G239800.1	Wheat	nucleus	56.41	61.54
TraesCS6B01G266800.3	Wheat	nucleus	56.41	61.54
Solyc06g036300.2.1	Tomato	nucleus, plastid	58.97	61.13
Os02t0680700-01	Rice	nucleus	56.73	60.82
Zm00001d017609_P011	Maize	nucleus	53.21	60.81
CDY52837	Canola	nucleus	59.62	60.78
Bra003117.1-P	Field mustard	nucleus	59.62	60.78
GSMUA_Achr5P10280_001	Banana	nucleus	52.24	59.93
Bra029111.1-P	Field mustard	nucleus	60.9	59.38
CDY56155	Canola	nucleus	60.9	58.82
AT5G52660.2	Thale cress	nucleus	62.18	58.61
KRH40382	Soybean	nucleus	53.53	58.19
GSMUA_Achr7P17560_001	Banana	nucleus	55.77	58.0
CDY27841	Canola	nucleus	52.88	57.69
KRH06589	Soybean	nucleus	60.9	57.23
PGSC0003DMT400074344	Potato	plastid	52.56	56.75
KRH48063	Soybean	nucleus	59.62	56.19
CDY51831	Canola	vacuole	60.9	54.6
KRH00849	Soybean	nucleus	53.21	53.9
HORVU0Hr1G031850.1	Barley	nucleus, plastid	56.73	53.15
KRH32383	Soybean	plastid	49.36	52.38
Os06t0105800-02	Rice	nucleus	49.36	51.68
HORVU7Hr1G001830.3	Barley	nucleus	44.87	51.66
KRG95914	Soybean	nucleus	47.44	51.21
TraesCS6A01G258600.2	Wheat	nucleus	56.09	51.17
KRH19794	Soybean	nucleus	49.04	50.83
Os06t0669700-01	Rice	nucleus	39.74	50.2
TraesCS7D01G014900.2	Wheat	nucleus	45.51	50.18
TraesCS7A01G017600.1	Wheat	nucleus	44.55	50.0
KXG20579	Sorghum	nucleus	54.17	49.85
EER89043	Sorghum	nucleus	49.68	48.9
KRH67632	Soybean	nucleus	46.79	48.83
TraesCS7D01G458000.1	Wheat	nucleus	52.88	48.39
TraesCS7A01G470700.1	Wheat	nucleus	52.56	48.24
TraesCS7B01G372500.1	Wheat	nucleus	52.56	48.09
TraesCS4A01G474100.2	Wheat	nucleus	46.79	47.25
Zm00001d046974_P002	Maize	nucleus	50.0	46.29
Zm00001d045581_P002	Maize	nucleus	46.79	46.2
Zm00001d036632_P002	Maize	nucleus	51.28	44.57
GSMUA_Achr1P03720_001	Banana	nucleus	49.04	44.48
GSMUA_Achr1P06480_001	Banana	plastid	58.65	42.56
HORVU7Hr1G107550.3	Barley	nucleus	52.56	38.77
GSMUA_Achr1P15370_001	Banana	mitochondrion	13.78	35.25
KRH20042	Soybean	nucleus	22.76	24.74
KRG98008	Soybean	nucleus	23.72	20.5
KRH17280	Soybean	nucleus	26.6	19.04
KRH72927	Soybean	nucleus	25.64	18.35
KRH09476	Soybean	nucleus	25.64	16.77
KRH38938	Soybean	nucleus	24.68	16.52
KRH68974	Soybean	nucleus	26.6	11.1
KRH06339	Soybean	nucleus	25.64	10.67
KRH47757	Soybean	nucleus	25.0	10.4
KRG97259	Soybean	nucleus, plastid	25.96	9.89

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100794389	MapMan:15.5.2.2	MapMan:27.1.6.2	EMBL:ACUP02006660	EnsemblPlantsGene:GLYMA_10G230700
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:K7LKZ8
EnsemblPlants:KRH35235	ProteinID:KRH35235	ProteinID:KRH35235.1	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249
PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF83	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689
TIGRFAMs:TIGR01557	UniParc:UPI000295F63B	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:46060022..46065739

Molecular Weight (calculated)

34755.3 Da

IEP (calculated)

9.707

GRAVY (calculated)

-0.518

Length

312 amino acids

Sequence
(BLAST)

001: MVSKNPNPSE ALNLDPSGMS LPGILPFAAA AAAAVSFEDP AKKTRKPYTI TKSRESWTEP EHDKFLEALQ LFDRDWKKIE AFVGSKTVIQ IRSHAQKYFL
101: KVQKSGTSEH LPPPRPKRKA VHPYPQKASK NVPVLSQVSG SFQSSSALLE PGYILKHDSS AMPKTSIIDT TVSSWSNNYL QKTTNVLHGQ KQKVNNCCSS
201: SESPRAQLVG ESNGRGNNSH PLRVLPDFAE VYNFIGSVFD PNITGHVQKL KRMDPIDVET VLLLMRNLSI NLASPDFEDH RRLLASYEVE PEVDKYINAD
301: RTMLDVRLKS AT

Best Arabidopsis Sequence Match ( AT5G52660.1 )
(BLAST)

001: MVSRNSDGYF LDPTGMTVPG LGPSFTAAVS SSSSPTTSST AVAVADVTAM VSSSEEDLSK KIRKPYTITK SRESWTEPEH DKFLEALQLF DRDWKKIEAF
101: IGSKTVIQIR SHAQKYFLKV QKSGTGEHLP PPRPKRKAAH PYPQKAHKNV QLQVPGSFKS TSEPNDPSFM FRPESSSMLM TSPTTAAAAP WTNNAQTISF
201: TPLPKGAGAN NNCSSSSENT PRPRSNRDAR DHGNVGHSLR VLPDFAQVYG FIGSVFDPYA SNHLQKLKKM DPIDVETVLL LMRNLSINLS SPDFEDHRRL
301: LSSYDIGSET ATDHGGVNKT LNKDPPEIST

Arabidopsis Description

RVE6Protein REVEILLE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0W3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.