Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52837 | Canola | nucleus | 95.1 | 88.89 |
| CDY56155 | Canola | nucleus | 86.36 | 76.47 |
| AT5G52660.2 | Thale cress | nucleus | 84.97 | 73.41 |
| CDY51831 | Canola | vacuole | 86.01 | 70.69 |
| KRH08856 | Soybean | nucleus | 56.99 | 54.15 |
| KRH35235 | Soybean | nucleus | 57.69 | 52.88 |
| Solyc06g036300.2.1 | Tomato | nucleus, plastid | 54.9 | 52.16 |
| TraesCS6B01G266800.3 | Wheat | nucleus | 52.1 | 52.1 |
| TraesCS6D01G239800.1 | Wheat | nucleus | 52.1 | 52.1 |
| HORVU6Hr1G066000.1 | Barley | nucleus | 51.4 | 51.94 |
| KXG31009 | Sorghum | nucleus | 50.35 | 51.25 |
| Os02t0680700-01 | Rice | nucleus | 52.1 | 51.2 |
| Zm00001d017609_P011 | Maize | nucleus | 48.25 | 50.55 |
| VIT_16s0050g01180.t01 | Wine grape | nucleus | 58.74 | 49.85 |
| KRG91589 | Soybean | nucleus | 57.34 | 49.85 |
| GSMUA_Achr5P10280_001 | Banana | nucleus | 46.5 | 48.9 |
| CDX90039 | Canola | plastid | 46.15 | 48.89 |
| CDY15171 | Canola | nucleus | 46.15 | 48.89 |
| Os06t0669700-01 | Rice | nucleus | 41.61 | 48.18 |
| PGSC0003DMT400074344 | Potato | plastid | 47.55 | 47.06 |
| GSMUA_Achr7P17560_001 | Banana | nucleus | 48.95 | 46.67 |
| KRH38371 | Soybean | nucleus | 56.64 | 45.89 |
| HORVU0Hr1G031850.1 | Barley | nucleus, plastid | 51.4 | 44.14 |
| CDY07188 | Canola | nucleus | 45.8 | 43.96 |
| CDX80840 | Canola | nucleus | 40.91 | 43.33 |
| TraesCS6A01G258600.2 | Wheat | nucleus | 51.75 | 43.27 |
| CDX70341 | Canola | nucleus | 42.66 | 42.81 |
| HORVU7Hr1G001830.3 | Barley | nucleus | 40.56 | 42.8 |
| Os06t0105800-02 | Rice | nucleus | 44.41 | 42.62 |
| CDY41299 | Canola | nucleus | 42.31 | 42.61 |
| CDY44719 | Canola | nucleus | 44.76 | 42.11 |
| TraesCS7D01G014900.2 | Wheat | nucleus | 41.61 | 42.05 |
| CDY11228 | Canola | nucleus | 40.56 | 42.03 |
| CDY41598 | Canola | nucleus | 44.06 | 41.86 |
| TraesCS7A01G017600.1 | Wheat | nucleus | 40.56 | 41.73 |
| CDY48515 | Canola | nucleus | 44.41 | 41.5 |
| KXG20579 | Sorghum | nucleus | 48.25 | 40.71 |
| TraesCS4A01G474100.2 | Wheat | nucleus | 43.71 | 40.45 |
| TraesCS7A01G470700.1 | Wheat | nucleus | 46.85 | 39.41 |
| TraesCS7B01G372500.1 | Wheat | nucleus | 46.85 | 39.3 |
| TraesCS7D01G458000.1 | Wheat | nucleus | 46.85 | 39.3 |
| EER89043 | Sorghum | nucleus | 43.36 | 39.12 |
| Zm00001d046974_P002 | Maize | nucleus | 44.76 | 37.98 |
| GSMUA_Achr1P03720_001 | Banana | nucleus | 43.36 | 36.05 |
| Zm00001d036632_P002 | Maize | nucleus | 45.1 | 35.93 |
| Zm00001d045581_P002 | Maize | nucleus | 39.16 | 35.44 |
| GSMUA_Achr1P15370_001 | Banana | mitochondrion | 15.04 | 35.25 |
| GSMUA_Achr1P06480_001 | Banana | plastid | 51.75 | 34.42 |
| HORVU7Hr1G107550.3 | Barley | nucleus | 47.2 | 31.91 |
| CDY10419 | Canola | nucleus | 42.66 | 22.85 |
| CDY16939 | Canola | nucleus | 20.28 | 19.33 |
| CDY38566 | Canola | nucleus | 19.93 | 17.76 |
| CDY26997 | Canola | nucleus | 19.23 | 17.13 |
| CDX69388 | Canola | nucleus | 21.68 | 16.58 |
| CDY26169 | Canola | nucleus | 18.18 | 16.56 |
| CDY02714 | Canola | nucleus | 20.98 | 16.26 |
| CDX85462 | Canola | nucleus | 20.98 | 16.09 |
| CDX70747 | Canola | nucleus | 19.58 | 15.51 |
| CDX78737 | Canola | nucleus | 19.58 | 15.34 |
| CDY19206 | Canola | nucleus | 17.48 | 13.81 |
| CDX80051 | Canola | nucleus | 22.38 | 11.59 |
| CDX80750 | Canola | nucleus | 21.68 | 10.93 |
| CDY61862 | Canola | nucleus | 22.03 | 10.75 |
| CDX90004 | Canola | nucleus | 21.68 | 10.2 |
| CDY15205 | Canola | nucleus | 21.68 | 9.94 |
| CDY41563 | Canola | nucleus | 23.08 | 8.78 |
| CDY64825 | Canola | cytosol, nucleus, plastid | 2.1 | 3.82 |
| CDX80052 | Canola | cytosol | 0.7 | 0.93 |
Protein Annotations
| EnsemblPlants:CDY27841 | EnsemblPlantsGene:GSBRNA2T00038674001 | Gene3D:1.10.10.60 | GO:A0A078GQY7 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | PANTHER:PTHR12802 | PANTHER:PTHR12802:SF83 | ProteinID:CDY27841 |
| ProteinID:CDY27841.1 | SEG:seg | SUPFAM:SSF46689 | UniParc:UPI0004EB1AD0 | UniProt:A0A078GQY7 | MapMan:15.5.2.2 |
| MapMan:27.1.6.2 | : | : | : | : | : |
Description
BnaC09g28680DBnaC09g28680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GQY7]
Coordinates
chrLK032210:-:401029..403400
Molecular Weight (calculated)
31666.6 Da
IEP (calculated)
9.647
GRAVY (calculated)
-0.567
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPADGSFLD PNGTMTVPAI GPLTSSEDLS KKIRKPYTIT IFTESGFDRD WKKIEAFIGS KTVIQIRSHA QKYFLKVQKS GTAEHLPPPR PKRKAAHPYP
101: QKAQMNVLPQ VPGSFKSTAE PNDPSYMFRP ESSSMLMTSP PPTAAPWTNN VQTISFTPLP KETAGANNNC SSSSENTPRP RSSKDTMQAN PGHSLRVLPD
201: FGQVYSFIGS VFDPYASNHL QKLKKMDPIE VETVLLLMRN LSINLSSPDF EVHRRLLSSY DIGFETATDH GGVFKTLNKE PPEIST
101: QKAQMNVLPQ VPGSFKSTAE PNDPSYMFRP ESSSMLMTSP PPTAAPWTNN VQTISFTPLP KETAGANNNC SSSSENTPRP RSSKDTMQAN PGHSLRVLPD
201: FGQVYSFIGS VFDPYASNHL QKLKKMDPIE VETVLLLMRN LSINLSSPDF EVHRRLLSSY DIGFETATDH GGVFKTLNKE PPEIST
001: MVSRNSDGYF LDPTGMTVPG LGPSFTAAVS SSSSPTTSST AVAVADVTAM VSSSEEDLSK KIRKPYTITK SRESWTEPEH DKFLEALQLF DRDWKKIEAF
101: IGSKTVIQIR SHAQKYFLKV QKSGTGEHLP PPRPKRKAAH PYPQKAHKNV QLQVPGSFKS TSEPNDPSFM FRPESSSMLM TSPTTAAAAP WTNNAQTISF
201: TPLPKAGAGA NNNCSSSSEN TPRPRSNRDA RDHGNVGHSL RVLPDFAQVY GFIGSVFDPY ASNHLQKLKK MDPIDVETVL LLMRNLSINL SSPDFEDHRR
301: LLSSYDIGSE TATDHGGVNK TLNKDPPEIS T
101: IGSKTVIQIR SHAQKYFLKV QKSGTGEHLP PPRPKRKAAH PYPQKAHKNV QLQVPGSFKS TSEPNDPSFM FRPESSSMLM TSPTTAAAAP WTNNAQTISF
201: TPLPKAGAGA NNNCSSSSEN TPRPRSNRDA RDHGNVGHSL RVLPDFAQVY GFIGSVFDPY ASNHLQKLKK MDPIDVETVL LLMRNLSINL SSPDFEDHRR
301: LLSSYDIGSE TATDHGGVNK TLNKDPPEIS T
Arabidopsis Description
RVE6Protein REVEILLE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0W3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.