Factsheet for Os06t0669700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG20579	Sorghum	nucleus	80.16	58.41
Os06t0105800-02	Rice	nucleus	68.42	56.71
TraesCS7B01G372500.1	Wheat	nucleus	75.71	54.84
Zm00001d046974_P002	Maize	nucleus	73.68	54.01
Zm00001d036632_P002	Maize	nucleus	70.85	48.75
Os02t0680700-01	Rice	nucleus	56.68	48.11
GSMUA_Achr7P17560_001	Banana	nucleus	56.28	46.33
Solyc06g036300.2.1	Tomato	nucleus, plastid	54.25	44.52
KRH08856	Soybean	nucleus	51.82	42.52
CDY27841	Canola	nucleus	48.18	41.61
PGSC0003DMT400074344	Potato	plastid	48.18	41.18
VIT_16s0050g01180.t01	Wine grape	nucleus	55.87	40.95
Bra003117.1-P	Field mustard	nucleus	49.39	39.87
CDY52837	Canola	nucleus	49.39	39.87
KRH35235	Soybean	nucleus	50.2	39.74
Bra029111.1-P	Field mustard	nucleus	50.61	39.06
CDY56155	Canola	nucleus	50.61	38.7
KRG91589	Soybean	nucleus	51.42	38.6
AT5G52660.2	Thale cress	nucleus	50.2	37.46
CDY51831	Canola	vacuole	50.61	35.92
KRH38371	Soybean	nucleus	51.01	35.69
Os01t0156000-01	Rice	nucleus	33.6	27.12
Os05t0162800-00	Rice	mitochondrion, nucleus	22.27	26.7
Os04t0583900-01	Rice	nucleus	23.08	12.31
Os06t0728700-01	Rice	nucleus	21.05	11.53
Os02t0685200-01	Rice	nucleus	22.27	11.2
Os08t0157600-01	Rice	nucleus	20.65	7.09

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	MapMan:27.1.6.2	ProteinID:BAF20238.1	ProteinID:BAS99065.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	EnsemblPlantsGene:Os06g0669700
EnsemblPlants:Os06t0669700-01	PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF85	UniProt:Q0DA85	InterPro:SANT/Myb
SUPFAM:SSF46689	UniParc:UPI0000E12905	SEG:seg	:	:	:

Description

MYB transcription factorSimilar to DNA binding protein. (Os06t0669700-01)

Coordinates

chr6:-:27734973..27738465

Molecular Weight (calculated)

26669.6 Da

IEP (calculated)

7.504

GRAVY (calculated)

-0.363

Length

247 amino acids

Sequence
(BLAST)

001: FDRDWKKIEA YVGSKTVIQI RSHAQKYFLK VQKNGTGEHL PPPRPKRKAA HPYPQKASKN ACAVSPAAIS QPPPLGEQGC VMSMDTSPVI RNTNASAVVP
101: SWDNSIAQPL SASRTQGTGA VATNNCSSSI ESPSTTWPTS EAVEQENMLR PLRAMPDFAQ VYSFLGSIFD PDTSGHLQTL KAMDPIDVET VLLLMRNLSM
201: NLTSPNFAAH LSLLSSCNSG GDPIKSEGME NLGSPQSCHL PFMVTSE

Best Arabidopsis Sequence Match ( AT5G52660.2 )
(BLAST)

001: MVSRNSDGYF LDPTGMTVPG LGPSFTAAVS SSSSPTTSST AVAVADVTAM VSSSEEDLSK KIRKPYTITK SRESWTEPEH DKFLEALQLF DRDWKKIEAF
101: IGSKTVIQIR SHAQKYFLKV QKSGTGEHLP PPRPKRKAAH PYPQKAHKNV QLQVPGSFKS TSEPNDPSFM FRPESSSMLM TSPTTAAAAP WTNNAQTISF
201: TPLPKAGAGA NNNCSSSSEN TPRPRSNRDA RDHGNVGHSL RVLPDFAQVY GFIGSVFDPY ASNHLQKLKK MDPIDVETVL LLMRNLSINL SSPDFEDHRR
301: LLSSYDIGSE TATDHGGVNK TLNKDPPEIS T

Arabidopsis Description

RVE6Protein REVEILLE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0W3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.