Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG20579 | Sorghum | nucleus | 85.76 | 85.25 |
| Zm00001d036632_P002 | Maize | nucleus | 78.64 | 73.82 |
| Os06t0669700-01 | Rice | nucleus | 54.01 | 73.68 |
| TraesCS7B01G372500.1 | Wheat | nucleus | 69.14 | 68.33 |
| Zm00001d024547_P001 | Maize | peroxisome | 10.39 | 58.33 |
| Zm00001d017609_P011 | Maize | nucleus | 47.18 | 58.24 |
| Zm00001d045581_P002 | Maize | nucleus | 50.15 | 53.48 |
| GSMUA_Achr7P17560_001 | Banana | nucleus | 47.48 | 53.33 |
| KRH08856 | Soybean | nucleus | 45.7 | 51.16 |
| Solyc06g036300.2.1 | Tomato | nucleus, plastid | 45.4 | 50.83 |
| KRH35235 | Soybean | nucleus | 46.29 | 50.0 |
| Bra029111.1-P | Field mustard | nucleus | 45.99 | 48.44 |
| Bra003117.1-P | Field mustard | nucleus | 43.92 | 48.37 |
| CDY52837 | Canola | nucleus | 43.92 | 48.37 |
| KRG91589 | Soybean | nucleus | 47.18 | 48.33 |
| PGSC0003DMT400074344 | Potato | plastid | 41.25 | 48.1 |
| CDY56155 | Canola | nucleus | 45.99 | 47.99 |
| VIT_16s0050g01180.t01 | Wine grape | nucleus | 47.48 | 47.48 |
| Zm00001d015487_P001 | Maize | nucleus | 10.98 | 47.44 |
| AT5G52660.2 | Thale cress | nucleus | 45.4 | 46.22 |
| CDY51831 | Canola | vacuole | 46.29 | 44.83 |
| CDY27841 | Canola | nucleus | 37.98 | 44.76 |
| KRH38371 | Soybean | nucleus | 45.4 | 43.34 |
| Zm00001d023295_P001 | Maize | nucleus | 10.98 | 38.95 |
| Zm00001d034947_P001 | Maize | mitochondrion | 19.29 | 38.69 |
| Zm00001d034946_P001 | Maize | mitochondrion | 19.29 | 38.69 |
| Zm00001d034945_P001 | Maize | mitochondrion, nucleus | 19.58 | 38.6 |
| Zm00001d039785_P001 | Maize | nucleus | 27.6 | 33.1 |
| Zm00001d044969_P001 | Maize | cytosol | 9.2 | 32.98 |
| Zm00001d032105_P001 | Maize | plastid | 10.98 | 29.13 |
| Zm00001d012051_P001 | Maize | plastid | 10.68 | 26.47 |
| Zm00001d011020_P001 | Maize | extracellular | 12.17 | 20.2 |
| Zm00001d051480_P001 | Maize | nucleus | 21.07 | 17.97 |
| Zm00001d014863_P002 | Maize | nucleus | 21.66 | 16.9 |
| Zm00001d002545_P002 | Maize | nucleus | 21.96 | 16.82 |
| Zm00001d026017_P001 | Maize | nucleus | 21.96 | 16.34 |
| Zm00001d017642_P001 | Maize | nucleus | 21.66 | 15.63 |
| Zm00001d049543_P003 | Maize | nucleus | 22.55 | 10.56 |
| Zm00001d024546_P001 | Maize | nucleus | 10.39 | 5.28 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.2 | MapMan:27.1.6.2 | UniProt:A0A1D6P5S2 | ProteinID:AQL05289.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants |
| PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR12802 | PANTHER:PTHR12802:SF85 | InterPro:SANT/Myb | SMART:SM00717 |
| SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI000844B285 | EnsemblPlantsGene:Zm00001d046974 | EnsemblPlants:Zm00001d046974_P002 | EnsemblPlants:Zm00001d046974_T002 |
| SEG:seg | : | : | : | : | : |
Description
MYB-related-transcription factor 86Protein REVEILLE 6
Coordinates
chr9:-:113773320..113784454
Molecular Weight (calculated)
36284.2 Da
IEP (calculated)
7.876
GRAVY (calculated)
-0.375
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSMNTTPNP LDSAAGSAAV AGGSVDEGGG GGGRKKRMRG AVAAAMVPPP MAVPLPAAAP AAGEEVRKVR KPYTITKSRE SWTEPEHDKF LEALQLFDRD
101: WKKIEAYVGS KTVIQIRSHA QKYFLKVQKN GTGEHLPPPR PKRKAAHPYP QKSSKNVSQT ILLQEQPTQR EQGSVMPMDT ATVINTNANV AVAVAVPSWD
201: NTLAQSLSAG LVPGATNNCS SSIESPSGTW PTSEAVEQEI VVPSLHAMPD FARVYSFLGS IFDPDTSGHL QRLKVMDPID IQTVLLLMRN LSTNLRSPDF
301: EQHLLVIYGG GDHVKPEGME NHGSPQSGHL PFLVTSE
101: WKKIEAYVGS KTVIQIRSHA QKYFLKVQKN GTGEHLPPPR PKRKAAHPYP QKSSKNVSQT ILLQEQPTQR EQGSVMPMDT ATVINTNANV AVAVAVPSWD
201: NTLAQSLSAG LVPGATNNCS SSIESPSGTW PTSEAVEQEI VVPSLHAMPD FARVYSFLGS IFDPDTSGHL QRLKVMDPID IQTVLLLMRN LSTNLRSPDF
301: EQHLLVIYGG GDHVKPEGME NHGSPQSGHL PFLVTSE
001: MSSSPSRNPT NAEAPPPPPT STDAVAEGSS KKVRKPYTIT KSRESWTEEE HDKFLEALQL FDRDWKKIED FVGSKTVIQI RSHAQKYFLK VQKNGTLAHV
101: PPPRPKRKAA HPYPQKASKN AQMPLQVSTS FTTTRNGDMP GYASWDDASM LLNRVISPQH ELATLRGAEA DIGSKGLLNV SSPSTSGMGS SSRTVSGSEI
201: VRKAKQPPVL HGVPDFAEVY NFIGSVFDPE TRGHVEKLKE MDPINFETVL LLMRNLTVNL SNPDLESTVS VKFAIKDL
101: PPPRPKRKAA HPYPQKASKN AQMPLQVSTS FTTTRNGDMP GYASWDDASM LLNRVISPQH ELATLRGAEA DIGSKGLLNV SSPSTSGMGS SSRTVSGSEI
201: VRKAKQPPVL HGVPDFAEVY NFIGSVFDPE TRGHVEKLKE MDPINFETVL LLMRNLTVNL SNPDLESTVS VKFAIKDL
Arabidopsis Description
RVE8Protein REVEILLE 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.