Factsheet for Zm00001d023295_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 2
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, vacuole
MultiLoc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015487_P001	Maize	nucleus	53.68	65.38
Zm00001d032105_P001	Maize	plastid	41.05	30.71
Zm00001d039785_P001	Maize	nucleus	83.16	28.11
Os01t0156000-01	Rice	nucleus	66.32	20.59
TraesCS3B01G151500.1	Wheat	nucleus	57.89	19.23
OQU86282	Sorghum	nucleus	77.89	19.12
TraesCS3A01G308500.1	Wheat	nucleus	58.95	18.79
TraesCS3D01G134000.1	Wheat	nucleus	58.95	18.79
Zm00001d034946_P001	Maize	mitochondrion	32.63	18.45
Zm00001d034947_P001	Maize	mitochondrion	32.63	18.45
Zm00001d024547_P001	Maize	peroxisome	11.58	18.33
Zm00001d034945_P001	Maize	mitochondrion, nucleus	32.63	18.13
GSMUA_Achr3P17770_001	Banana	nucleus	42.11	16.74
HORVU3Hr1G025030.1	Barley	nucleus	60.0	13.29
Zm00001d017609_P011	Maize	nucleus	35.79	12.45
Zm00001d045581_P002	Maize	nucleus	40.0	12.03
Zm00001d046974_P002	Maize	nucleus	38.95	10.98
Zm00001d036632_P002	Maize	nucleus	37.89	10.03
Zm00001d051480_P001	Maize	nucleus	31.58	7.59
Zm00001d017642_P001	Maize	nucleus	32.63	6.64
Zm00001d026017_P001	Maize	nucleus	31.58	6.62
Zm00001d002545_P002	Maize	nucleus	30.53	6.59
Zm00001d014863_P002	Maize	nucleus	29.47	6.48
Zm00001d049543_P003	Maize	nucleus	32.63	4.31
Zm00001d024546_P001	Maize	nucleus	7.37	1.06
Zm00001d011020_P001	Maize	extracellular	2.11	0.99
Zm00001d044969_P001	Maize	cytosol	0.0	0.0
Zm00001d012051_P001	Maize	plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.10.60	MapMan:35.2	UniProt:A0A1D6IRH3	ProteinID:AQK38863.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249
PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF85	InterPro:SANT/Myb	SUPFAM:SSF46689	TIGRFAMs:TIGR01557
UniParc:UPI0008442BFF	EnsemblPlantsGene:Zm00001d023295	EnsemblPlants:Zm00001d023295_P001	EnsemblPlants:Zm00001d023295_T001	SEG:seg	:

Description

Protein REVEILLE 8

Coordinates

chr10:-:2275658..2276154

Molecular Weight (calculated)

10718.3 Da

IEP (calculated)

10.885

GRAVY (calculated)

-0.124

Length

95 amino acids

Sequence
(BLAST)

1: MFLRYLFSLL RFGCDWKKIE EHVGTKTTVQ IRSHAQKYFL KVQKLGLAVG LPLMYPRRHF AMQQQQQSSV AGGSSATAMP LLHGRQPTCA PVAMP

Best Arabidopsis Sequence Match ( AT3G09600.3 )
(BLAST)

001: MFLRFDRDWK KIEDFVGSKT VIQIRSHAQK YFLKVQKNGT LAHVPPPRPK RKAAHPYPQK ASKNAQMPLQ VSTSFTTTRN GDMPGYASWD DASMLLNRVI
101: SPQHELATLR GAEADIGSKG LLNVSSPSTS GMGSSSRTVS GSEIVRKAKQ PPVLHGVPDF AEVYNFIGSV FDPETRGHVE KLKEMDPINF ETVLLLMRNL
201: TVNLSNPDLE STRKVLLSYD NVTTELPSVV SLVKNSTSDK SA

Arabidopsis Description

RVE8Protein REVEILLE 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.