Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG31009 | Sorghum | nucleus | 93.41 | 90.75 |
| Os02t0680700-01 | Rice | nucleus | 86.08 | 80.76 |
| HORVU6Hr1G066000.1 | Barley | nucleus | 82.78 | 79.86 |
| TraesCS6D01G239800.1 | Wheat | nucleus | 82.78 | 79.02 |
| TraesCS6B01G266800.3 | Wheat | nucleus | 82.42 | 78.67 |
| HORVU0Hr1G031850.1 | Barley | nucleus, plastid | 82.78 | 67.87 |
| TraesCS6A01G258600.2 | Wheat | nucleus | 82.05 | 65.5 |
| GSMUA_Achr5P10280_001 | Banana | nucleus | 60.44 | 60.66 |
| Zm00001d024547_P001 | Maize | peroxisome | 12.45 | 56.67 |
| KRH08856 | Soybean | nucleus | 59.34 | 53.82 |
| Solyc06g036300.2.1 | Tomato | nucleus, plastid | 59.34 | 53.82 |
| KRH35235 | Soybean | nucleus | 60.81 | 53.21 |
| CDY52837 | Canola | nucleus | 58.61 | 52.29 |
| Bra003117.1-P | Field mustard | nucleus | 58.61 | 52.29 |
| Bra029111.1-P | Field mustard | nucleus | 60.81 | 51.88 |
| CDY56155 | Canola | nucleus | 60.81 | 51.39 |
| VIT_16s0050g01180.t01 | Wine grape | nucleus | 62.27 | 50.45 |
| PGSC0003DMT400074344 | Potato | plastid | 52.75 | 49.83 |
| AT5G52660.2 | Thale cress | nucleus | 60.07 | 49.55 |
| KRG91589 | Soybean | nucleus | 59.71 | 49.54 |
| CDY27841 | Canola | nucleus | 50.55 | 48.25 |
| CDY51831 | Canola | vacuole | 60.44 | 47.41 |
| Zm00001d046974_P002 | Maize | nucleus | 58.24 | 47.18 |
| GSMUA_Achr1P03720_001 | Banana | nucleus | 57.14 | 45.35 |
| KRH38371 | Soybean | nucleus | 58.24 | 45.04 |
| Zm00001d015487_P001 | Maize | nucleus | 12.82 | 44.87 |
| Zm00001d036632_P002 | Maize | nucleus | 58.24 | 44.29 |
| Zm00001d045581_P002 | Maize | nucleus | 50.92 | 43.99 |
| Zm00001d034946_P001 | Maize | mitochondrion | 24.54 | 39.88 |
| Zm00001d034947_P001 | Maize | mitochondrion | 24.54 | 39.88 |
| Zm00001d034945_P001 | Maize | mitochondrion, nucleus | 24.54 | 39.18 |
| Zm00001d044969_P001 | Maize | cytosol | 13.19 | 38.3 |
| Zm00001d023295_P001 | Maize | nucleus | 12.45 | 35.79 |
| Zm00001d039785_P001 | Maize | nucleus | 33.7 | 32.74 |
| Zm00001d012051_P001 | Maize | plastid | 13.55 | 27.21 |
| Zm00001d032105_P001 | Maize | plastid | 12.45 | 26.77 |
| Zm00001d011020_P001 | Maize | extracellular | 16.12 | 21.67 |
| Zm00001d051480_P001 | Maize | nucleus | 26.74 | 18.48 |
| Zm00001d014863_P002 | Maize | nucleus | 27.47 | 17.36 |
| Zm00001d002545_P002 | Maize | nucleus | 26.37 | 16.36 |
| Zm00001d017642_P001 | Maize | nucleus | 27.84 | 16.27 |
| Zm00001d026017_P001 | Maize | nucleus | 26.01 | 15.67 |
| Zm00001d049543_P003 | Maize | nucleus | 31.14 | 11.81 |
| Zm00001d024546_P001 | Maize | nucleus | 16.12 | 6.64 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100280329 | MapMan:15.5.2.2 | MapMan:27.1.6.2 | UniProt:A0A1D6HFZ3 | ProteinID:AQK73549.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom |
| InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR12802 | PANTHER:PTHR12802:SF83 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0008438AA5 | EnsemblPlantsGene:Zm00001d017609 | EnsemblPlants:Zm00001d017609_P011 |
| EnsemblPlants:Zm00001d017609_T011 | SEG:seg | : | : | : | : |
Description
MYB-related-transcription factor 100Protein REVEILLE 6
Coordinates
chr5:-:201463304..201477264
Molecular Weight (calculated)
29737.0 Da
IEP (calculated)
9.751
GRAVY (calculated)
-0.563
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSASAPPPQ AQSDAAGSGE EVSKKVRKPY TITKSRESWT EQEHDKFLEA LQLFDRDWKK IEAFVGSKTV IQIRSHAQKY LLKVQKNGTS EHVPPPRPKR
101: KAAHPYPQKA SKNDSSSIHR NSGMNVPVSS WAHSSIPQAV ASSMVKDLGA GTPGSNNFCS SSTEGLPRTW QPGETNDPIN QIPSLRLMPD FAGVYSFLGS
201: VFDPSTSGHL QKLKEMNPID VETALLLMRN LSINLTSPDF EDQRKLLSLY SASDGPGLGS SRSSALATSA PFM
101: KAAHPYPQKA SKNDSSSIHR NSGMNVPVSS WAHSSIPQAV ASSMVKDLGA GTPGSNNFCS SSTEGLPRTW QPGETNDPIN QIPSLRLMPD FAGVYSFLGS
201: VFDPSTSGHL QKLKEMNPID VETALLLMRN LSINLTSPDF EDQRKLLSLY SASDGPGLGS SRSSALATSA PFM
001: MVSRNSDGYF LDPTGMTVPG LGPSFTAAVS SSSSPTTSST AVAVADVTAM VSSSEEDLSK KIRKPYTITK SRESWTEPEH DKFLEALQLF DRDWKKIEAF
101: IGSKTVIQIR SHAQKYFLKV QKSGTGEHLP PPRPKRKAAH PYPQKAHKNV QLQVPGSFKS TSEPNDPSFM FRPESSSMLM TSPTTAAAAP WTNNAQTISF
201: TPLPKAGAGA NNNCSSSSEN TPRPRSNRDA RDHGNVGHSL RVLPDFAQVY GFIGSVFDPY ASNHLQKLKK MDPIDVETVL LLMRNLSINL SSPDFEDHRR
301: LLSSYDIGSE TATDHGGVNK TLNKDPPEIS T
101: IGSKTVIQIR SHAQKYFLKV QKSGTGEHLP PPRPKRKAAH PYPQKAHKNV QLQVPGSFKS TSEPNDPSFM FRPESSSMLM TSPTTAAAAP WTNNAQTISF
201: TPLPKAGAGA NNNCSSSSEN TPRPRSNRDA RDHGNVGHSL RVLPDFAQVY GFIGSVFDPY ASNHLQKLKK MDPIDVETVL LLMRNLSINL SSPDFEDHRR
301: LLSSYDIGSE TATDHGGVNK TLNKDPPEIS T
Arabidopsis Description
RVE6Protein REVEILLE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0W3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.