Factsheet for HORVU0Hr1G031850.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 4
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G066000.1	Barley	nucleus	84.98	100.0
TraesCS6D01G239800.1	Wheat	nucleus	83.78	97.55
TraesCS6B01G266800.3	Wheat	nucleus	83.78	97.55
KXG31009	Sorghum	nucleus	72.37	85.77
Os02t0680700-01	Rice	nucleus	73.87	84.54
Zm00001d017609_P011	Maize	nucleus	67.87	82.78
TraesCS6A01G258600.2	Wheat	nucleus	82.28	80.12
GSMUA_Achr5P10280_001	Banana	nucleus	51.65	63.24
KRH08856	Soybean	nucleus	52.55	58.14
Solyc06g036300.2.1	Tomato	nucleus, plastid	51.35	56.81
KRH35235	Soybean	nucleus	53.15	56.73
CDY52837	Canola	nucleus	50.75	55.23
Bra003117.1-P	Field mustard	nucleus	50.45	54.9
Bra029111.1-P	Field mustard	nucleus	51.95	54.06
CDY56155	Canola	nucleus	51.95	53.56
KRG91589	Soybean	nucleus	52.85	53.5
VIT_16s0050g01180.t01	Wine grape	nucleus	54.05	53.41
PGSC0003DMT400074344	Potato	plastid	45.65	52.6
AT5G52660.2	Thale cress	nucleus	51.65	51.96
CDY51831	Canola	vacuole	54.05	51.72
CDY27841	Canola	nucleus	44.14	51.4
HORVU7Hr1G001830.3	Barley	nucleus	41.44	50.92
KRH38371	Soybean	nucleus	53.15	50.14
GSMUA_Achr1P03720_001	Banana	nucleus	47.75	46.22
HORVU7Hr1G107550.3	Barley	nucleus	51.05	40.19
HORVU3Hr1G025030.1	Barley	nucleus	30.63	23.78
HORVU2Hr1G104580.2	Barley	nucleus	21.62	15.58
HORVU7Hr1G121210.4	Barley	nucleus	21.62	14.66
HORVU6Hr1G066450.2	Barley	golgi, mitochondrion, plastid, vacuole	23.42	14.42
HORVU7Hr1G070870.2	Barley	nucleus	24.62	11.44

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	MapMan:27.1.6.2	UniProt:A0A287EAJ9	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	EnsemblPlantsGene:HORVU0Hr1G031850	EnsemblPlants:HORVU0Hr1G031850.1	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF83	InterPro:SANT/Myb
SMART:SM00717	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000B486E0A	SEG:seg	:

Description

No Description!

Coordinates

chrchrUn:-:189951868..189955930

Molecular Weight (calculated)

36396.0 Da

IEP (calculated)

10.130

GRAVY (calculated)

-0.605

Length

333 amino acids

Sequence
(BLAST)

001: ATRPPRTQAQ PGGRTDAAAL RTKASLSSPP GPASERPAPN GTRHVRAFLL MVSTNPPPPP ALSDAAAGDD ASKKVRKPYT ITKSRESWTE QEHDKFLEAL
101: QLFDRDWKKI EAFVGSKTVI QIRSHAQKYF LKVQKNGTSE HVPPPRPKRK AAHPYPQKAS KNEPGYALKT DPSAMLRNSG MNVAVSSWTH NSIPPVVASS
201: FMKEDLGAGS MGPNIFCSSS SEGPPRAWQS GETNDQINQV PSLRIMPDFA QVYSFLGSVF DPNTKGHLQK LKEMNPIDVE TALLLMRNLS INLTSPDFED
301: QRKLLSSYNS TSDGLELGSS RSSLLTDSAL SLF

Best Arabidopsis Sequence Match ( AT5G52660.1 )
(BLAST)

001: MVSRNSDGYF LDPTGMTVPG LGPSFTAAVS SSSSPTTSST AVAVADVTAM VSSSEEDLSK KIRKPYTITK SRESWTEPEH DKFLEALQLF DRDWKKIEAF
101: IGSKTVIQIR SHAQKYFLKV QKSGTGEHLP PPRPKRKAAH PYPQKAHKNV QLQVPGSFKS TSEPNDPSFM FRPESSSMLM TSPTTAAAAP WTNNAQTISF
201: TPLPKGAGAN NNCSSSSENT PRPRSNRDAR DHGNVGHSLR VLPDFAQVYG FIGSVFDPYA SNHLQKLKKM DPIDVETVLL LMRNLSINLS SPDFEDHRRL
301: LSSYDIGSET ATDHGGVNKT LNKDPPEIST

Arabidopsis Description

RVE6Protein REVEILLE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0W3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.