Factsheet for HORVU7Hr1G107550.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G458000.1	Wheat	nucleus	74.23	92.08
TraesCS7A01G470700.1	Wheat	nucleus	73.76	91.76
TraesCS7B01G372500.1	Wheat	nucleus	73.76	91.5
HORVU7Hr1G001830.3	Barley	nucleus	40.19	62.73
HORVU6Hr1G066000.1	Barley	nucleus	39.24	58.66
GSMUA_Achr7P17560_001	Banana	nucleus	39.72	56.0
KRH08856	Soybean	nucleus	39.24	55.15
Solyc06g036300.2.1	Tomato	nucleus, plastid	38.3	53.82
KRH35235	Soybean	nucleus	38.77	52.56
PGSC0003DMT400074344	Potato	plastid	34.99	51.21
HORVU0Hr1G031850.1	Barley	nucleus, plastid	40.19	51.05
Bra029111.1-P	Field mustard	nucleus	38.53	50.94
CDY56155	Canola	nucleus	38.53	50.46
KRG91589	Soybean	nucleus	39.24	50.46
VIT_16s0050g01180.t01	Wine grape	nucleus	40.19	50.45
CDY52837	Canola	nucleus	36.41	50.33
Bra003117.1-P	Field mustard	nucleus	36.41	50.33
AT5G52660.2	Thale cress	nucleus	38.06	48.64
KRH38371	Soybean	nucleus	39.48	47.31
CDY27841	Canola	nucleus	31.91	47.2
CDY51831	Canola	vacuole	38.77	47.13
HORVU3Hr1G025030.1	Barley	nucleus	23.88	23.54
HORVU2Hr1G104580.2	Barley	nucleus	17.97	16.45
HORVU7Hr1G121210.4	Barley	nucleus	17.26	14.87
HORVU6Hr1G066450.2	Barley	golgi, mitochondrion, plastid, vacuole	17.26	13.49
HORVU7Hr1G070870.2	Barley	nucleus	18.68	11.02

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	MapMan:27.1.6.2	UniProt:A0A287XPX1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	EnsemblPlantsGene:HORVU7Hr1G107550	EnsemblPlants:HORVU7Hr1G107550.3	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF85	InterPro:SANT/Myb
SMART:SM00717	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000B468AA9	SEG:seg	:

Description

No Description!

Coordinates

chrchr7H:+:623414061..623419285

Molecular Weight (calculated)

46316.8 Da

IEP (calculated)

9.285

GRAVY (calculated)

-0.608

Length

423 amino acids

Sequence
(BLAST)

001: RPDEPARERP HRPFPKQPSH THTHARRRER EREGGRKEAE TLATAAQRSY HRRSFVRSFS RRMVSMSTTP KPLEAAVAAV GGGGGDGGGG GKGKGKEQQL
101: AAGPPMAVPA DAAAAEEARM KVRKPYTITK SRESWTEPEH DKFLEALQLF DRDWKKIEAF VGSKTVIQIR SHAQKYFLKV QKNGTGEHLP PPRPKRKAAH
201: PYPQKASKTG TYCPCFYFLV SGTNCLYFSS SAIMLTKLCL APVASQAVLS QQPPLPPPRD QDGVIMSMDT SAVVPNTNAN ALVPSWDNAL VQPTQVTSAV
301: ATNNCSSSIE SQSGTWPTSE AVEQENVLPR AMPDFSQVYN FLGSVFDPDT SGHLQRLKAM DPIDVETVLL LMRNLSVNLI NPEFEAHRQL LSSYGSGGDE
401: NKPEGMDNLG SQSSHLPSMV TSE

Best Arabidopsis Sequence Match ( AT1G01520.1 )
(BLAST)

001: MVTVNPSQAH CLPMKMSLPG FNTLPHTATT IPVSIRSNRT MSFFEDPTKK VRKPYTITKS RENWTEQEHD KFLEALHLFD RDWKKIKAFV GSKTVIQIRS
101: HAQKYFLKVQ KNGTKEHLPP PRPKRKANHP YPQKAPKFTL SSSNALFQHD YLYNTNSHPV ISTTRKHGLV HCDVSIPSSV IKEEFGVSEN CCSTSSSRDK
201: QRTRIVTETN DQESCGKPHR VAPNFAEVYN FIGSVFDPKT TGHVKRLKEM DPINLETVLL LMKNLSVNLT SPEFDEQRKL ISSYNAS

Arabidopsis Description

ASG4 [Source:UniProtKB/TrEMBL;Acc:A0A178W835]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.