Factsheet for TraesCS7A01G470700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G372500.1	Wheat	nucleus	97.94	97.65
TraesCS7D01G458000.1	Wheat	nucleus	96.76	96.48
HORVU7Hr1G107550.3	Barley	nucleus	91.76	73.76
TraesCS7A01G017600.1	Wheat	nucleus	51.18	62.59
TraesCS4A01G474100.2	Wheat	nucleus	53.24	58.58
GSMUA_Achr7P17560_001	Banana	nucleus	50.29	57.0
KRH08856	Soybean	nucleus	50.0	56.48
Solyc06g036300.2.1	Tomato	nucleus, plastid	47.94	54.15
KRH35235	Soybean	nucleus	48.24	52.56
PGSC0003DMT400074344	Potato	plastid	43.53	51.21
KRG91589	Soybean	nucleus	48.82	50.46
VIT_16s0050g01180.t01	Wine grape	nucleus	49.71	50.15
CDY52837	Canola	nucleus	45.0	50.0
Bra029111.1-P	Field mustard	nucleus	47.06	50.0
Bra003117.1-P	Field mustard	nucleus	45.0	50.0
CDY56155	Canola	nucleus	47.06	49.54
AT5G52660.2	Thale cress	nucleus	47.06	48.34
TraesCS6A01G258600.2	Wheat	nucleus	48.24	47.95
KRH38371	Soybean	nucleus	49.41	47.59
CDY27841	Canola	nucleus	39.41	46.85
CDY51831	Canola	vacuole	47.06	45.98
TraesCS1A01G107700.1	Wheat	mitochondrion	23.53	36.53
TraesCS3A01G308500.1	Wheat	nucleus	27.94	31.88
TraesCS2A01G456600.1	Wheat	nucleus	22.06	17.94
TraesCS6A01G261100.1	Wheat	nucleus	20.88	15.01
TraesCS7A01G553800.1	Wheat	nucleus	21.76	14.54
TraesCS7A01G299400.3	Wheat	nucleus	22.65	10.32

Protein Annotations

EnsemblPlants:TraesCS7A01G470700.1	EnsemblPlantsGene:TraesCS7A01G470700	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	InterPro:SANT/Myb
PANTHER:PTHR12802	PANTHER:PTHR12802:SF85	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	TIGR:cd00167	TIGRFAMs:TIGR01557	MapMan:15.5.2.2	MapMan:27.1.6.2	:

Description

No Description!

Coordinates

chr7A:-:666807556..666812030

Molecular Weight (calculated)

36211.7 Da

IEP (calculated)

6.408

GRAVY (calculated)

-0.517

Length

340 amino acids

Sequence
(BLAST)

001: MVSMSTTPKP LEAGAAAAAV GGGGGDGGGG GGGKGGKGKE QQQVAVAAGP PMAVPADAAE DARMKVRKPY TITKSRESWT EPEHDKFLEA LQLFDRDWKK
101: IEAFVGSKTV IQIRSHAQKY FLKVQKNGTG EHLPPPRPKR KAAHPYPQKA SKTAPVASQA VLPQQPAPPP PPPRDQDGVN VSMDASMVVP STNANAVVPS
201: WDNALVQPTQ VTSAIATNNC SSSIESQSGT WPTSEAVEQE NVLPQMRAMP DFSQVYNFLG SVFDPDTTGH LQRLKAMDPI DVETVLLLMR NLSVNLINPE
301: FEAHRQLLSS YGSGGDENKP EGMENLGSQS SHLPSMVTSE

Best Arabidopsis Sequence Match ( AT1G01520.1 )
(BLAST)

001: MVTVNPSQAH CLPMKMSLPG FNTLPHTATT IPVSIRSNRT MSFFEDPTKK VRKPYTITKS RENWTEQEHD KFLEALHLFD RDWKKIKAFV GSKTVIQIRS
101: HAQKYFLKVQ KNGTKEHLPP PRPKRKANHP YPQKAPKFTL SSSNALFQHD YLYNTNSHPV ISTTRKHGLV HCDVSIPSSV IKEEFGVSEN CCSTSSSRDK
201: QRTRIVTETN DQESCGKPHR VAPNFAEVYN FIGSVFDPKT TGHVKRLKEM DPINLETVLL LMKNLSVNLT SPEFDEQRKL ISSYNAS

Arabidopsis Description

ASG4 [Source:UniProtKB/TrEMBL;Acc:A0A178W835]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.