Factsheet for TraesCS7A01G017600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G001830.3	Barley	nucleus	91.73	94.1
TraesCS7D01G014900.2	Wheat	nucleus	94.24	92.58
TraesCS4A01G474100.2	Wheat	nucleus	91.73	82.52
Os06t0105800-02	Rice	nucleus	65.47	61.07
EER89043	Sorghum	nucleus	65.11	57.1
Zm00001d045581_P002	Maize	nucleus	59.35	52.22
TraesCS7A01G470700.1	Wheat	nucleus	62.59	51.18
GSMUA_Achr7P17560_001	Banana	nucleus	52.16	48.33
Solyc06g036300.2.1	Tomato	nucleus, plastid	50.36	46.51
KRH08856	Soybean	nucleus	49.28	45.51
PGSC0003DMT400074344	Potato	plastid	46.76	44.98
KRH35235	Soybean	nucleus	50.0	44.55
CDY52837	Canola	nucleus	47.48	43.14
Bra003117.1-P	Field mustard	nucleus	47.48	43.14
Bra029111.1-P	Field mustard	nucleus	49.28	42.81
CDY56155	Canola	nucleus	49.28	42.41
KRG91589	Soybean	nucleus	50.0	42.25
VIT_16s0050g01180.t01	Wine grape	nucleus	50.72	41.84
AT5G52660.2	Thale cress	nucleus	49.28	41.39
TraesCS6A01G258600.2	Wheat	nucleus	50.0	40.64
CDY27841	Canola	nucleus	41.73	40.56
CDY51831	Canola	vacuole	49.28	39.37
KRH38371	Soybean	nucleus	48.2	37.96
TraesCS1A01G107700.1	Wheat	mitochondrion	26.98	34.25
TraesCS3A01G308500.1	Wheat	nucleus	32.37	30.2
TraesCS2A01G456600.1	Wheat	nucleus	26.98	17.94
TraesCS6A01G261100.1	Wheat	nucleus	26.26	15.43
TraesCS7A01G553800.1	Wheat	nucleus	24.82	13.56
TraesCS7A01G299400.3	Wheat	nucleus	28.06	10.46

Protein Annotations

EnsemblPlants:TraesCS7A01G017600.1	EnsemblPlantsGene:TraesCS7A01G017600	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	InterPro:SANT/Myb
PANTHER:PTHR12802	PANTHER:PTHR12802:SF85	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	TIGR:cd00167	TIGRFAMs:TIGR01557	MapMan:15.5.2.2	MapMan:27.1.6.2	:

Description

No Description!

Coordinates

chr7A:+:7593176..7597725

Molecular Weight (calculated)

30469.6 Da

IEP (calculated)

5.334

GRAVY (calculated)

-0.552

Length

278 amino acids

Sequence
(BLAST)

001: MAAVMESAVA GVGGGGGAEE GAEAGRVRKP YTITKSRESW TDPEHDKFIE ALLLFDRDWR KIEAFVGSKT VIQIRSHAQK YFLKVQKNGT GEHLPPPRPK
101: RKAAHPYPHN KASKKAPEVD LPQQPPHVVE QGCAIPMDAP TVATNSSAND TFPSWDDVLT QPYSPRHTQD LGAANNSSSS IECQSGTWAT SDAIEQETWP
201: TSDAIEQEIV LPALHAMPDF AQVYNFLGGV FDPDTTGHLQ KLREMDPIDA ETVLQLMKNL SVNLSGPDFE THLSIQHP

Best Arabidopsis Sequence Match ( AT3G09600.1 )
(BLAST)

001: MSSSPSRNPT NAEAPPPPPT STDAVAEGSS KKVRKPYTIT KSRESWTEEE HDKFLEALQL FDRDWKKIED FVGSKTVIQI RSHAQKYFLK VQKNGTLAHV
101: PPPRPKRKAA HPYPQKASKN AQMPLQVSTS FTTTRNGDMP GYASWDDASM LLNRVISPQH ELATLRGAEA DIGSKGLLNV SSPSTSGMGS SSRTVSGSEI
201: VRKAKQPPVL HGVPDFAEVY NFIGSVFDPE TRGHVEKLKE MDPINFETVL LLMRNLTVNL SNPDLESTRK VLLSYDNVTT ELPSVVSLVK NSTSDKSA

Arabidopsis Description

RVE8Protein REVEILLE 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.