Factsheet for Os06t0105800-02

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER89043	Sorghum	nucleus	72.82	68.45
Os06t0669700-01	Rice	nucleus	56.71	68.42
HORVU7Hr1G001830.3	Barley	nucleus	60.74	66.79
TraesCS7D01G014900.2	Wheat	nucleus	63.09	66.43
TraesCS7A01G017600.1	Wheat	nucleus	61.07	65.47
TraesCS4A01G474100.2	Wheat	nucleus	65.77	63.43
TraesCS7B01G372500.1	Wheat	nucleus	67.11	58.65
Zm00001d045581_P002	Maize	nucleus	61.74	58.23
Os02t0680700-01	Rice	nucleus	53.36	54.64
GSMUA_Achr7P17560_001	Banana	nucleus	54.7	54.33
KRH08856	Soybean	nucleus	51.01	50.5
Solyc06g036300.2.1	Tomato	nucleus, plastid	51.01	50.5
KRH35235	Soybean	nucleus	51.68	49.36
PGSC0003DMT400074344	Potato	plastid	45.97	47.4
Bra003117.1-P	Field mustard	nucleus	48.66	47.39
CDY52837	Canola	nucleus	48.66	47.39
KRG91589	Soybean	nucleus	52.01	47.11
Bra029111.1-P	Field mustard	nucleus	50.34	46.88
VIT_16s0050g01180.t01	Wine grape	nucleus	52.68	46.59
CDY56155	Canola	nucleus	50.34	46.44
AT5G52660.2	Thale cress	nucleus	50.0	45.02
CDY27841	Canola	nucleus	42.62	44.41
CDY51831	Canola	vacuole	50.0	42.82
KRH38371	Soybean	nucleus	50.67	42.78
Os05t0162800-00	Rice	mitochondrion, nucleus	25.17	36.41
Os01t0156000-01	Rice	nucleus	32.21	31.37
Os06t0728700-01	Rice	nucleus	24.83	16.41
Os04t0583900-01	Rice	nucleus	25.17	16.2
Os02t0685200-01	Rice	nucleus	25.17	15.27
Os08t0157600-01	Rice	nucleus	25.84	10.71

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	MapMan:27.1.6.2	EntrezGene:4339863	EMBL:AK111672	EMBL:AK119640
ProteinID:BAD67706.1	ProteinID:BAF18473.1	ProteinID:BAS95745.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	EnsemblPlantsGene:Os06g0105800	EnsemblPlants:Os06t0105800-02
PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF85	UniProt:Q5VS69	InterPro:SANT/Myb
SMART:SM00717	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI0000457C58	RefSeq:XP_015642931.1	SEG:seg

Description

Homeodomain-like containing protein. (Os06t0105800-02)

Coordinates

chr6:-:398679..403494

Molecular Weight (calculated)

33212.4 Da

IEP (calculated)

7.475

GRAVY (calculated)

-0.591

Length

298 amino acids

Sequence
(BLAST)

001: MSSAPQQLLD SSSPGPGPGP EVEDDGGRRV RKPYTITKSR ESWTDPEHDK FLEALQLFDR DWKKIEAYVG SKTVIQIRSH AQKYFLKVQK NGTGEHLPPP
101: RPKRKAAHPY PHKASKRAPQ VVLPQQASHL MEQGCLIPMD ISPVARNFNA NDVFSSWDSA LAQSFSPRHT HGAANNCSSS VESQSGTCPT SEAIEQEIML
201: PTLRAMPDFA QVYNFLGSIF DPETSGHLQR LREMDPIDVE TVLLLMKNLS INLTNPNFEA HRKVLASHGY GMDQVKHENL GDLGSTHTLH LPFMVTTK

Best Arabidopsis Sequence Match ( AT5G52660.2 )
(BLAST)

001: MVSRNSDGYF LDPTGMTVPG LGPSFTAAVS SSSSPTTSST AVAVADVTAM VSSSEEDLSK KIRKPYTITK SRESWTEPEH DKFLEALQLF DRDWKKIEAF
101: IGSKTVIQIR SHAQKYFLKV QKSGTGEHLP PPRPKRKAAH PYPQKAHKNV QLQVPGSFKS TSEPNDPSFM FRPESSSMLM TSPTTAAAAP WTNNAQTISF
201: TPLPKAGAGA NNNCSSSSEN TPRPRSNRDA RDHGNVGHSL RVLPDFAQVY GFIGSVFDPY ASNHLQKLKK MDPIDVETVL LLMRNLSINL SSPDFEDHRR
301: LLSSYDIGSE TATDHGGVNK TLNKDPPEIS T

Arabidopsis Description

RVE6Protein REVEILLE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0W3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.