CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045581_P002	Maize	nucleus	74.45	74.68
Os06t0105800-02	Rice	nucleus	68.45	72.82
HORVU7Hr1G001830.3	Barley	nucleus	57.1	66.79
TraesCS7D01G014900.2	Wheat	nucleus	59.62	66.78
TraesCS7A01G017600.1	Wheat	nucleus	57.1	65.11
TraesCS4A01G474100.2	Wheat	nucleus	60.88	62.46
KXG20579	Sorghum	nucleus	66.56	62.24
TraesCS7B01G372500.1	Wheat	nucleus	62.15	57.77
KXG31009	Sorghum	nucleus	48.58	54.8
GSMUA_Achr7P17560_001	Banana	nucleus	51.42	54.33
KRH08856	Soybean	nucleus	47.63	50.17
Solyc06g036300.2.1	Tomato	nucleus, plastid	47.32	49.83
KRH35235	Soybean	nucleus	48.9	49.68
KRG91589	Soybean	nucleus	49.84	48.02
Bra029111.1-P	Field mustard	nucleus	47.95	47.5
CDY56155	Canola	nucleus	47.95	47.06
Bra003117.1-P	Field mustard	nucleus	45.11	46.73
CDY52837	Canola	nucleus	45.11	46.73
VIT_16s0050g01180.t01	Wine grape	nucleus	49.21	46.29
PGSC0003DMT400074344	Potato	plastid	41.96	46.02
AT5G52660.2	Thale cress	nucleus	47.63	45.62
CDY51831	Canola	vacuole	47.95	43.68
CDY27841	Canola	nucleus	39.12	43.36
KRH38371	Soybean	nucleus	47.95	43.06
OQU91224	Sorghum	mitochondrion, nucleus	19.87	33.33
OQU86282	Sorghum	nucleus	30.6	25.06
KXG20957	Sorghum	nucleus	23.66	17.28
EES12724	Sorghum	nucleus	23.34	16.7
EES05718	Sorghum	nucleus	23.34	16.26
EES13385	Sorghum	nucleus	23.97	10.17

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	MapMan:27.1.6.2	EntrezGene:8066871	UniProt:C5Z255	EnsemblPlants:EER89043
ProteinID:EER89043	ProteinID:EER89043.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf
InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR12802
PANTHER:PTHR12802:SF85	InterPro:SANT/Myb	SMART:SM00717	EnsemblPlantsGene:SORBI_3010G004300	SUPFAM:SSF46689	unigene:Sbi.312
TIGRFAMs:TIGR01557	UniParc:UPI0001A8998F	RefSeq:XP_002437676.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:-:381687..386837

Molecular Weight (calculated)

34820.8 Da

IEP (calculated)

6.568

GRAVY (calculated)

-0.661

Length

317 amino acids

Sequence
(BLAST)

001: MVSMSTTPHP LDPSVPAVAG GGKEEEEEAG RAREEAAAAA AAPAAVPVPT VGNDDDDDGP RRVRKPYTIT KSRESWTDPE HDKFLEALQL FDRDWKKIEA
101: YVGSKTVIQI RSHAQKYFLK VQKNGTGEHL PPPRPKRKAA HPYPHKASKK ALQVVLPQQA SHIMEQGCGT PMDTATVATD SSANDAFPVQ HFSPRHTQGA
201: TYNNSSSIGS QSGTWPTSEG TEQDIRHPAL SAMPDFARVY NFLGSIFDPE TNGHLQQLKE MDPIDAETVL LLMKNLSINL TSPNFEEHRR LLSSHASSMD
301: QEMGSSHIHL PFMITSK

Best Arabidopsis Sequence Match ( AT5G52660.2 )
(BLAST)

001: MVSRNSDGYF LDPTGMTVPG LGPSFTAAVS SSSSPTTSST AVAVADVTAM VSSSEEDLSK KIRKPYTITK SRESWTEPEH DKFLEALQLF DRDWKKIEAF
101: IGSKTVIQIR SHAQKYFLKV QKSGTGEHLP PPRPKRKAAH PYPQKAHKNV QLQVPGSFKS TSEPNDPSFM FRPESSSMLM TSPTTAAAAP WTNNAQTISF
201: TPLPKAGAGA NNNCSSSSEN TPRPRSNRDA RDHGNVGHSL RVLPDFAQVY GFIGSVFDPY ASNHLQKLKK MDPIDVETVL LLMRNLSINL SSPDFEDHRR
301: LLSSYDIGSE TATDHGGVNK TLNKDPPEIS T

Arabidopsis Description

RVE6Protein REVEILLE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0W3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.