Factsheet for HORVU7Hr1G001830.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G017600.1	Wheat	nucleus	94.1	91.73
TraesCS7D01G014900.2	Wheat	nucleus	93.36	89.4
Os06t0105800-02	Rice	nucleus	66.79	60.74
EER89043	Sorghum	nucleus	66.79	57.1
Zm00001d045581_P002	Maize	nucleus	59.41	50.95
HORVU6Hr1G066000.1	Barley	nucleus	50.92	48.76
GSMUA_Achr7P17560_001	Banana	nucleus	53.14	48.0
Solyc06g036300.2.1	Tomato	nucleus, plastid	51.66	46.51
PGSC0003DMT400074344	Potato	plastid	48.34	45.33
KRH08856	Soybean	nucleus	50.18	45.18
KRH35235	Soybean	nucleus	51.66	44.87
Bra003117.1-P	Field mustard	nucleus	48.71	43.14
CDY52837	Canola	nucleus	48.71	43.14
Bra029111.1-P	Field mustard	nucleus	50.55	42.81
CDY56155	Canola	nucleus	50.55	42.41
VIT_16s0050g01180.t01	Wine grape	nucleus	52.4	42.14
KRG91589	Soybean	nucleus	50.92	41.95
HORVU0Hr1G031850.1	Barley	nucleus, plastid	50.92	41.44
AT5G52660.2	Thale cress	nucleus	50.55	41.39
CDY27841	Canola	nucleus	42.8	40.56
HORVU7Hr1G107550.3	Barley	nucleus	62.73	40.19
CDY51831	Canola	vacuole	50.55	39.37
KRH38371	Soybean	nucleus	49.08	37.68
HORVU3Hr1G025030.1	Barley	nucleus	32.84	20.75
HORVU2Hr1G104580.2	Barley	nucleus	26.94	15.8
HORVU7Hr1G121210.4	Barley	nucleus	25.83	14.26
HORVU6Hr1G066450.2	Barley	golgi, mitochondrion, plastid, vacuole	26.2	13.12
HORVU7Hr1G070870.2	Barley	nucleus	28.78	10.88

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	MapMan:27.1.6.2	UniProt:A0A287VDA0	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	EnsemblPlantsGene:HORVU7Hr1G001830	EnsemblPlants:HORVU7Hr1G001830.3	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF85	InterPro:SANT/Myb
SMART:SM00717	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000B46D4D0	SEG:seg	:

Description

No Description!

Coordinates

chrchr7H:+:3848283..3850992

Molecular Weight (calculated)

29406.5 Da

IEP (calculated)

5.771

GRAVY (calculated)

-0.518

Length

271 amino acids

Sequence
(BLAST)

001: MAAVMESAVS GGGGGXXXXA AGRVRKPYTI TKSRESWTDP EHDKFIEALL LFDRDWRKIE AFVGSKTVIQ IRSHAQKYFL KVQKNGTGEH LPPPRPKRKA
101: AHPYPHNKAS KKAPEVDLPQ QPPHIVEQGC VVPMDAPTVA TNSSADDTFP SWDNVLTQPY SPRHTQDLGA ANNSSSSIEC QSGTWPTSDA IEQEAWLTSD
201: ATEQEIILPA LHAMPDFAQV YNFLGGVFDP DTTGHLQKLR EMDPIDAETV LQLMKNLSVN LSGPDFETHL L

Best Arabidopsis Sequence Match ( AT3G09600.1 )
(BLAST)

001: MSSSPSRNPT NAEAPPPPPT STDAVAEGSS KKVRKPYTIT KSRESWTEEE HDKFLEALQL FDRDWKKIED FVGSKTVIQI RSHAQKYFLK VQKNGTLAHV
101: PPPRPKRKAA HPYPQKASKN AQMPLQVSTS FTTTRNGDMP GYASWDDASM LLNRVISPQH ELATLRGAEA DIGSKGLLNV SSPSTSGMGS SSRTVSGSEI
201: VRKAKQPPVL HGVPDFAEVY NFIGSVFDPE TRGHVEKLKE MDPINFETVL LLMRNLTVNL SNPDLESTRK VLLSYDNVTT ELPSVVSLVK NSTSDKSA

Arabidopsis Description

RVE8Protein REVEILLE 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.