Factsheet for HORVU2Hr1G104580.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G478700.1	Wheat	nucleus	80.74	89.88
TraesCS2D01G456900.1	Wheat	nucleus	80.09	88.94
TraesCS2A01G456600.1	Wheat	nucleus	80.3	88.76
Os04t0583900-01	Rice	nucleus	54.11	54.0
EES12724	Sorghum	nucleus	46.1	48.08
Zm00001d002545_P002	Maize	nucleus	44.59	46.82
Zm00001d026017_P001	Maize	nucleus	44.16	45.03
GSMUA_Achr8P13440_001	Banana	nucleus	25.97	31.66
HORVU6Hr1G066450.2	Barley	golgi, mitochondrion, plastid, vacuole	35.71	30.5
HORVU7Hr1G001830.3	Barley	nucleus	15.8	26.94
HORVU6Hr1G066000.1	Barley	nucleus	15.58	25.44
Solyc03g098320.2.1	Tomato	nucleus	24.68	24.89
HORVU7Hr1G121210.4	Barley	nucleus	26.19	24.64
PGSC0003DMT400065850	Potato	nucleus	23.81	23.61
GSMUA_AchrUn_...	Banana	nucleus	23.16	22.91
GSMUA_Achr11P...	Banana	nucleus	23.59	22.8
HORVU0Hr1G031850.1	Barley	nucleus, plastid	15.58	21.62
HORVU7Hr1G107550.3	Barley	nucleus	16.45	17.97
HORVU7Hr1G070870.2	Barley	nucleus	24.46	15.76
HORVU3Hr1G025030.1	Barley	nucleus	13.42	14.45

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	UniProt:A0A287JA90	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:HORVU2Hr1G104580	EnsemblPlants:HORVU2Hr1G104580.2	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants
PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF45	InterPro:SANT/Myb	SMART:SM00717
SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000B47D3E5	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr2H:-:704121826..704124086

Molecular Weight (calculated)

50477.8 Da

IEP (calculated)

6.432

GRAVY (calculated)

-0.719

Length

462 amino acids

Sequence
(BLAST)

001: LLFLSSPLPS LEEEEDQEQQ QRLGAGGELA SVPRSEIWLR RCFDFSRISG DMARFQETKP DLSNSGSDTR MMGEARLPKA RKPYMITKQR EKWTEEEHRL
101: FLEAMQLHGR AWRRIQEHIG TKTAVQIRSH AQKFFSKVTR DSSGDSGGNS SSGAAGPPIQ IPPPRPKRKS VHPYPCNLRS AQPGKHAHAL LRVDRPRLSM
201: CEQGNGSPTS VVTTSRIALG SESFDSDTST IDIEEPCPTP STGTADVAVQ APPTDDDAKR SKDSGSNSEE VVCDNTSDAP VLKLFGKTVV VNPGTCNLQT
301: ASDMELDTSA ETPTSAPEAK TWSPWLANSQ QFMYYVPQGA VFFSYNNGSA PYPMPSSPKA DQQHEQQASE AAAELRRREA SSNTASSSVA ETTARNSAES
401: CTGAVGGDDE MSHAAGLRKP VSPAFVQQRG FMPYKRCAAE TRALLPQAPR EEADREMTRL CL

Best Arabidopsis Sequence Match ( AT5G37260.1 )
(BLAST)

001: MAMQERCESL CSDELISSSD AFYLKTRKPY TITKQREKWT EAEHEKFVEA LKLYGRAWRR IEEHVGTKTA VQIRSHAQKF FTKVARDFGV SSESIEIPPP
101: RPKRKPMHPY PRKLVIPDAK EMVYAELTGS KLIQDEDNRS PTSVLSAHGS DGLGSIGSNS PNSSSAELSS HTEESLSLEA ETKQSLKLFG KTFVVGDYNS
201: SMSCDDSEDG KKKLYSETQS LQCSSSTSEN AETEVVVSEF KRSERSAFSQ LKSSVTEMNN MRGFMPYKKR VKVEENIDNV KLSYPLW

Arabidopsis Description

RVE2Protein REVEILLE 2 [Source:UniProtKB/Swiss-Prot;Acc:F4K5X6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.