Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 11.99 | 66.67 |
| GSMUA_Achr11P... | Banana | nucleus | 59.74 | 58.37 |
| GSMUA_Achr8P13440_001 | Banana | nucleus | 32.55 | 40.11 |
| Zm00001d051480_P001 | Maize | nucleus | 23.77 | 28.1 |
| TraesCS6B01G288500.1 | Wheat | nucleus | 25.27 | 26.34 |
| EES05718 | Sorghum | nucleus | 25.48 | 26.15 |
| TraesCS6D01G241900.1 | Wheat | nucleus | 25.05 | 26.06 |
| GSMUA_Achr7P04620_001 | Banana | nucleus | 14.56 | 25.47 |
| TraesCS2A01G456600.1 | Wheat | nucleus | 22.48 | 25.12 |
| TraesCS2B01G478700.1 | Wheat | nucleus | 22.27 | 25.06 |
| Os04t0583900-01 | Rice | nucleus | 24.84 | 25.05 |
| TraesCS2D01G456900.1 | Wheat | nucleus | 22.06 | 24.76 |
| TraesCS6A01G261100.1 | Wheat | nucleus | 25.05 | 24.74 |
| GSMUA_Achr5P10280_001 | Banana | nucleus | 14.35 | 24.63 |
| Zm00001d017642_P001 | Maize | nucleus | 24.63 | 24.63 |
| Os02t0685200-01 | Rice | nucleus | 25.27 | 24.03 |
| EES12724 | Sorghum | nucleus | 22.48 | 23.7 |
| Zm00001d002545_P002 | Maize | nucleus | 22.06 | 23.41 |
| HORVU2Hr1G104580.2 | Barley | nucleus | 22.91 | 23.16 |
| Zm00001d026017_P001 | Maize | nucleus | 22.06 | 22.74 |
| GSMUA_Achr7P17560_001 | Banana | nucleus | 14.56 | 22.67 |
| Solyc03g098320.2.1 | Tomato | nucleus | 22.06 | 22.49 |
| PGSC0003DMT400065850 | Potato | nucleus | 22.06 | 22.1 |
| HORVU6Hr1G066450.2 | Barley | golgi, mitochondrion, plastid, vacuole | 25.48 | 22.0 |
| GSMUA_Achr1P03720_001 | Banana | nucleus | 13.92 | 18.9 |
| GSMUA_AchrUn_... | Banana | nucleus | 24.2 | 18.8 |
| GSMUA_Achr3P17770_001 | Banana | nucleus | 8.99 | 17.57 |
| GSMUA_Achr1P06360_001 | Banana | nucleus | 26.98 | 17.36 |
| GSMUA_Achr1P06480_001 | Banana | plastid | 14.13 | 15.35 |
| GSMUA_Achr10P... | Banana | nucleus | 17.34 | 13.41 |
| GSMUA_Achr1P15370_001 | Banana | mitochondrion | 3.43 | 13.11 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.2 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_AchrUn_randomG02340_001 |
| EnsemblPlants:GSMUA_AchrUn_randomP02340_001 | EnsemblPlants:GSMUA_AchrUn_randomT02340_001 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M0U5P6 | InterPro:Myb_dom |
| InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR12802 | PANTHER:PTHR12802:SF60 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI000295501B | SEG:seg | : |
Description
MYB family transcription factor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG02340_001]
Coordinates
chrchrUn_random:-:11193744..11195585
Molecular Weight (calculated)
50749.9 Da
IEP (calculated)
8.120
GRAVY (calculated)
-0.558
Length
467 amino acids
Sequence
(BLAST)
(BLAST)
001: MHVDVKISTT SIPQTKEIET SGEEQAPRIR KPYTITKQRE RWTEEEHRRF LEALQLYGRA WRRIEEHIGT KTAVQIRSHA QKFFSKVYDS FLSLAISRKC
101: GDSTGTLKAI EIPPPRPKRK PVHPYPRKLC NLLNKGTPAL KQLQRPPLQI SAICEHENRS PTSVLSAVGS ETLESTLSNG QMGCSSPVTS AAGSNDQDDG
201: GQSLTVTDEA DIKLPHSGPA FSGLTVQDQP RMEIDQCRHH AHALDESRLP TLKLFGKMVV VTDPNMSSAP PTAGDLAQPN LISSVGIKGD QEKKAECLPS
301: TRGVSPGDLT ASAGNTYSGL VPPLLYFFPL FGHNSTEPAF RPPSWWATRG NLPIPLVHSL PECPQQFNQE MQREGSWTGS NTACISGTSP SNQNADGVGS
401: RKEANSAQNG TMPLLRQQLS SVQASTSGTV GSARGFAPYK RCTVESEVQH AVADPDDGGS QAIRLCL
101: GDSTGTLKAI EIPPPRPKRK PVHPYPRKLC NLLNKGTPAL KQLQRPPLQI SAICEHENRS PTSVLSAVGS ETLESTLSNG QMGCSSPVTS AAGSNDQDDG
201: GQSLTVTDEA DIKLPHSGPA FSGLTVQDQP RMEIDQCRHH AHALDESRLP TLKLFGKMVV VTDPNMSSAP PTAGDLAQPN LISSVGIKGD QEKKAECLPS
301: TRGVSPGDLT ASAGNTYSGL VPPLLYFFPL FGHNSTEPAF RPPSWWATRG NLPIPLVHSL PECPQQFNQE MQREGSWTGS NTACISGTSP SNQNADGVGS
401: RKEANSAQNG TMPLLRQQLS SVQASTSGTV GSARGFAPYK RCTVESEVQH AVADPDDGGS QAIRLCL
001: MASSPLTANV QGTNASLRNR DEETADKQIQ FNDQSFGGND YAPKVRKPYT ITKERERWTD EEHKKFVEAL KLYGRAWRRI EEHVGSKTAV QIRSHAQKFF
101: SKVAREATGG DGSSVEPIVI PPPRPKRKPA HPYPRKFGNE ADQTSRSVSP SERDTQSPTS VLSTVGSEAL CSLDSSSPNR SLSPVSSASP PAALTTTANA
201: PEELETLKLE LFPSERLLNR ESSIKEPTKQ SLKLFGKTVL VSDSGMSSSL TTSTYCKSPI QPLPRKLSSS KTLPIIRNSQ EELLSCWIQV PLKQEDVENR
301: CLDSGKAVQN EGSSTGSNTG SVDDTGHTEK TTEPETMLCQ WEFKPSERSA FSELRRTNSE SNSRGFGPYK KRKMVTEEEE HEIHLHL
101: SKVAREATGG DGSSVEPIVI PPPRPKRKPA HPYPRKFGNE ADQTSRSVSP SERDTQSPTS VLSTVGSEAL CSLDSSSPNR SLSPVSSASP PAALTTTANA
201: PEELETLKLE LFPSERLLNR ESSIKEPTKQ SLKLFGKTVL VSDSGMSSSL TTSTYCKSPI QPLPRKLSSS KTLPIIRNSQ EELLSCWIQV PLKQEDVENR
301: CLDSGKAVQN EGSSTGSNTG SVDDTGHTEK TTEPETMLCQ WEFKPSERSA FSELRRTNSE SNSRGFGPYK KRKMVTEEEE HEIHLHL
Arabidopsis Description
RVE1Protein REVEILLE 1 [Source:UniProtKB/Swiss-Prot;Acc:F4KGY6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.