Factsheet for GSMUA_Achr7P04620_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P10280_001	Banana	nucleus	60.3	59.19
GSMUA_Achr7P17560_001	Banana	nucleus	65.92	58.67
CDY15171	Canola	nucleus	55.43	54.81
Bra033257.1-P	Field mustard	plastid	55.06	54.44
CDX90039	Canola	plastid	55.06	54.44
VIT_15s0046g02260.t01	Wine grape	nucleus	65.92	53.66
GSMUA_Achr10P...	Banana	nucleus	16.48	52.38
AT1G01520.3	Thale cress	plastid	54.31	50.52
KRH06589	Soybean	nucleus	61.8	49.7
KRH48063	Soybean	nucleus	61.05	49.24
CDY07188	Canola	nucleus	54.68	48.99
AT4G01280.2	Thale cress	nucleus	55.06	48.51
PGSC0003DMT400000546	Potato	nucleus	57.68	48.43
CDY48515	Canola	nucleus	53.56	46.73
Solyc01g095030.2.1	Tomato	nucleus	57.3	46.22
Bra037365.1-P	Field mustard	nucleus	55.06	43.36
GSMUA_Achr1P03720_001	Banana	nucleus	55.06	42.73
GSMUA_Achr1P06480_001	Banana	plastid	67.04	41.63
GSMUA_Achr1P15370_001	Banana	mitochondrion	18.35	40.16
GSMUA_Achr3P17770_001	Banana	nucleus	34.08	38.08
GSMUA_Achr8P13440_001	Banana	nucleus	25.47	17.94
GSMUA_Achr11P...	Banana	nucleus	26.59	14.85
GSMUA_AchrUn_...	Banana	nucleus	25.47	14.56
GSMUA_AchrUn_...	Banana	nucleus	23.97	10.65
GSMUA_Achr1P06360_001	Banana	nucleus	27.34	10.06
GSMUA_Achr10P...	Banana	nucleus	12.73	5.63

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	MapMan:27.1.6.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:GSMUA_Achr7G04620_001	EnsemblPlants:GSMUA_Achr7P04620_001	EnsemblPlants:GSMUA_Achr7T04620_001	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M0TEQ2
InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF83
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI0002962317	SEG:seg

Description

Putative Myb-like protein G [Source:GMGC_GENE;Acc:GSMUA_Achr7G04620_001]

Coordinates

chr7:-:3483747..3488638

Molecular Weight (calculated)

29515.1 Da

IEP (calculated)

8.146

GRAVY (calculated)

-0.418

Length

267 amino acids

Sequence
(BLAST)

001: MALPGCAAAP SSEDVGKKTR KPYTITKSRE SWTEQDHDKF LEALQLFDRD WKKIEAFVGS KTVIQIRSHA QKYFLKVQKN GTNEHVPPPR PKRKAAHPYP
101: QKAAKNVTQI PEVKTLLQTS CLLEPGYAST GETSSILRDS TTITGSSWVQ SSVQPVGTCH PIKDDKVNVG VMMANNCCSS SSGSPTTWPA CETTDQENQF
201: TSLHVTPDFA QVYGFLGSVF DPNTSGHLQK LKAMDPINIE TVLILMRNLH LNLTSPEFEA HVSLLVF

Best Arabidopsis Sequence Match ( AT5G52660.2 )
(BLAST)

001: MVSRNSDGYF LDPTGMTVPG LGPSFTAAVS SSSSPTTSST AVAVADVTAM VSSSEEDLSK KIRKPYTITK SRESWTEPEH DKFLEALQLF DRDWKKIEAF
101: IGSKTVIQIR SHAQKYFLKV QKSGTGEHLP PPRPKRKAAH PYPQKAHKNV QLQVPGSFKS TSEPNDPSFM FRPESSSMLM TSPTTAAAAP WTNNAQTISF
201: TPLPKAGAGA NNNCSSSSEN TPRPRSNRDA RDHGNVGHSL RVLPDFAQVY GFIGSVFDPY ASNHLQKLKK MDPIDVETVL LLMRNLSINL SSPDFEDHRR
301: LLSSYDIGSE TATDHGGVNK TLNKDPPEIS T

Arabidopsis Description

RVE6Protein REVEILLE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0W3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.