Factsheet for Bra033257.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90039	Canola	plastid	100.0	100.0
AT1G01520.3	Thale cress	plastid	71.48	67.25
GSMUA_Achr7P04620_001	Banana	nucleus	54.44	55.06
KRH40382	Soybean	nucleus	54.07	50.87
Bra034074.1-P	Field mustard	nucleus	48.89	50.19
VIT_15s0046g02260.t01	Wine grape	nucleus	60.74	50.0
KRH00849	Soybean	nucleus	56.3	49.35
Bra003117.1-P	Field mustard	nucleus	54.81	48.37
Bra029111.1-P	Field mustard	nucleus	55.56	46.88
PGSC0003DMT400000546	Potato	nucleus	54.44	46.23
Bra005751.1-P	Field mustard	nucleus	47.04	44.88
Bra037365.1-P	Field mustard	nucleus	55.93	44.54
Solyc01g095030.2.1	Tomato	nucleus	54.07	44.11
Bra029778.1-P	Field mustard	nucleus	48.89	43.42
Bra009562.1-P	Field mustard	nucleus	47.41	41.03
Bra039503.1-P	Field mustard	nucleus	25.93	21.02
Bra024430.1-P	Field mustard	mitochondrion, nucleus	15.19	19.16
Bra008563.1-P	Field mustard	nucleus	24.81	18.87
Bra023610.1-P	Field mustard	nucleus	25.19	18.33
Bra006394.1-P	Field mustard	nucleus	24.44	18.13
Bra025914.1-P	Field mustard	nucleus	21.85	17.66
Bra004503.1-P	Field mustard	nucleus	28.52	13.95
Bra033291.1-P	Field mustard	nucleus	26.67	11.86
Bra030496.1-P	Field mustard	nucleus	25.19	11.6
Bra004502.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	MapMan:27.1.6.2	EnsemblPlantsGene:Bra033257	EnsemblPlants:Bra033257.1	EnsemblPlants:Bra033257.1-P
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M4EWS2
InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF83
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI0002545320	:

Description

AT1G01520 (E=8e-114) | myb family transcription factor

Coordinates

chrA10:+:4641531..4642993

Molecular Weight (calculated)

31013.2 Da

IEP (calculated)

9.907

GRAVY (calculated)

-0.674

Length

270 amino acids

Sequence
(BLAST)

001: MNMSLPGFST TLPHSKTTMP VSARSHTMSF SEDPTKKIRK PYTITKSREN WTEQEHDKFI EALHLFDRDW KKIEAFVGSK TVIQIRSHAQ KYFLKVQKNG
101: TNEHLPPPRP KRKANHPYPQ KASKSVALTT SNALLEHEYL YPTDPQPVIS TPNHGLMRCN VITPIPVIKE ELGVLENCCS TSRSRSIRDK MRTRTVTETD
201: DQRVMPNFAE VYSFIGSVFD PKTTGHVQRL KQMDPINLET VLLLMKNLSV NLSSPEFEEQ RRLISSYNSE

Best Arabidopsis Sequence Match ( AT1G01520.1 )
(BLAST)

001: MVTVNPSQAH CLPMKMSLPG FNTLPHTATT IPVSIRSNRT MSFFEDPTKK VRKPYTITKS RENWTEQEHD KFLEALHLFD RDWKKIKAFV GSKTVIQIRS
101: HAQKYFLKVQ KNGTKEHLPP PRPKRKANHP YPQKAPKFTL SSSNALFQHD YLYNTNSHPV ISTTRKHGLV HCDVSIPSSV IKEEFGVSEN CCSTSSSRDK
201: QRTRIVTETN DQESCGKPHR VAPNFAEVYN FIGSVFDPKT TGHVKRLKEM DPINLETVLL LMKNLSVNLT SPEFDEQRKL ISSYNAS

Arabidopsis Description

ASG4 [Source:UniProtKB/TrEMBL;Acc:A0A178W835]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.