Factsheet for Bra037365.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48515	Canola	nucleus	86.43	95.75
AT4G01280.2	Thale cress	nucleus	66.96	74.92
Bra033257.1-P	Field mustard	plastid	44.54	55.93
GSMUA_Achr7P04620_001	Banana	nucleus	43.36	55.06
VIT_15s0046g02260.t01	Wine grape	nucleus	48.67	50.3
KRH40382	Soybean	nucleus	42.48	50.17
Bra034074.1-P	Field mustard	nucleus	36.87	47.53
KRH00849	Soybean	nucleus	43.07	47.4
Bra029111.1-P	Field mustard	nucleus	43.66	46.25
Bra003117.1-P	Field mustard	nucleus	41.59	46.08
Bra005751.1-P	Field mustard	nucleus	36.28	43.46
Solyc01g095030.2.1	Tomato	nucleus	41.89	42.9
PGSC0003DMT400000546	Potato	nucleus	40.12	42.77
Bra029778.1-P	Field mustard	nucleus	37.76	42.11
Bra009562.1-P	Field mustard	nucleus	37.46	40.71
Bra024430.1-P	Field mustard	mitochondrion, nucleus	13.57	21.5
Bra039503.1-P	Field mustard	nucleus	20.94	21.32
Bra008563.1-P	Field mustard	nucleus	21.53	20.56
Bra006394.1-P	Field mustard	nucleus	21.24	19.78
Bra023610.1-P	Field mustard	nucleus	21.24	19.41
Bra025914.1-P	Field mustard	nucleus	18.88	19.16
Bra004503.1-P	Field mustard	nucleus	20.65	12.68
Bra033291.1-P	Field mustard	nucleus	21.83	12.19
Bra030496.1-P	Field mustard	nucleus	19.47	11.26
Bra004502.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	MapMan:27.1.6.2	EnsemblPlantsGene:Bra037365	EnsemblPlants:Bra037365.1	EnsemblPlants:Bra037365.1-P
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009651	GO:GO:0009719
GO:GO:0009723	GO:GO:0009733	GO:GO:0009737	GO:GO:0009739	GO:GO:0009751	GO:GO:0009753
GO:GO:0009987	GO:GO:0046686	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M4F8F3	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF83	InterPro:SANT/Myb
SMART:SM00717	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI0002541A42	SEG:seg	:

Description

AT4G01280 (E=2e-084) | myb family transcription factor

Coordinates

chrA09:+:855721..857412

Molecular Weight (calculated)

37907.2 Da

IEP (calculated)

9.521

GRAVY (calculated)

-0.429

Length

339 amino acids

Sequence
(BLAST)

001: MVSLNARPAP FLDPVSVSFD SMASDSSDGF GFTPIATTPV TGRRDTASYK IRKPYTIKKS RENWTEQEHD KFLEALHLFD RDWKKIEAFV GSKTVVQIRS
101: HAQKYFLKVQ KSGANEHLPP PRPKRKARHP YPQKASKNVA LPSHAVCSIP SSNAPLLQPA YLYSSSDSQS LLGNPASSSS SLNHESTNLP KPVIQEEPGV
201: SATALPKNRC YSTSNKEVKP NLPTVTEPNN EEQSCEKPHR VMPNFAQVYR FIGSVFDPNT SGHIQRLKQM DPINIETVLL LMRNLSVNLT SPEFTEQVSS
301: AILIYIQLPL FLEIQKDFTK TLLVGGYSSG FVIYLQWCL

Best Arabidopsis Sequence Match ( AT4G01280.1 )
(BLAST)

001: MVSVNPRPKG FPVFDSSNMS LPSSDGFGSI PATGRTSTVS FSEDPTTKIR KPYTIKKSRE NWTDQEHDKF LEALHLFDRD WKKIEAFVGS KTVVQIRSHA
101: QKYFLKVQKS GANEHLPPPR PKRKASHPYP IKAPKNVAYT SLPSSSTLPL LEPGYLYSSD SKSLMGNQAV CASTSSSWNH ESTNLPKPVI EEEPGVSATA
201: PLPNNRCRQE DTERVRAVTK PNNEESCEKP HRVMPNFAEV YSFIGSVFDP NTSGHLQRLK QMDPINMETV LLLMQNLSVN LTSPEFAEQR RLISSYSAKA
301: LK

Arabidopsis Description

RVE5Protein REVEILLE 5 [Source:UniProtKB/Swiss-Prot;Acc:C0SVG5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.