Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07188 | Canola | nucleus | 88.24 | 90.6 |
| Bra037365.1-P | Field mustard | nucleus | 95.75 | 86.43 |
| AT4G01280.2 | Thale cress | nucleus | 75.16 | 75.91 |
| CDX90039 | Canola | plastid | 50.65 | 57.41 |
| CDY15171 | Canola | nucleus | 50.0 | 56.67 |
| GSMUA_Achr7P04620_001 | Banana | nucleus | 46.73 | 53.56 |
| VIT_15s0046g02260.t01 | Wine grape | nucleus | 54.58 | 50.91 |
| KRH40382 | Soybean | nucleus | 47.06 | 50.17 |
| KRH00849 | Soybean | nucleus | 48.04 | 47.73 |
| CDY52837 | Canola | nucleus | 47.39 | 47.39 |
| CDY56155 | Canola | nucleus | 49.35 | 46.75 |
| CDX80840 | Canola | nucleus | 39.87 | 45.19 |
| CDY27841 | Canola | nucleus | 41.5 | 44.41 |
| CDY41299 | Canola | nucleus | 41.18 | 44.37 |
| CDY11228 | Canola | nucleus | 39.87 | 44.2 |
| CDX70341 | Canola | nucleus | 40.52 | 43.51 |
| CDY51831 | Canola | vacuole | 49.35 | 43.39 |
| Solyc01g095030.2.1 | Tomato | nucleus | 46.73 | 43.2 |
| PGSC0003DMT400000546 | Potato | nucleus | 44.77 | 43.08 |
| CDY44719 | Canola | nucleus | 42.16 | 42.43 |
| CDY41598 | Canola | nucleus | 41.5 | 42.19 |
| CDY16939 | Canola | nucleus | 23.86 | 24.33 |
| CDY10419 | Canola | nucleus | 41.5 | 23.78 |
| CDY38566 | Canola | nucleus | 24.51 | 23.36 |
| CDY26997 | Canola | nucleus | 23.86 | 22.74 |
| CDX70747 | Canola | nucleus | 24.18 | 20.5 |
| CDY26169 | Canola | nucleus | 20.59 | 20.06 |
| CDX69388 | Canola | nucleus | 24.18 | 19.79 |
| CDY02714 | Canola | nucleus | 23.86 | 19.78 |
| CDX85462 | Canola | nucleus | 23.53 | 19.3 |
| CDX78737 | Canola | nucleus | 22.88 | 19.18 |
| CDY19206 | Canola | nucleus | 20.26 | 17.13 |
| CDX80051 | Canola | nucleus | 23.86 | 13.22 |
| CDX90004 | Canola | nucleus | 25.49 | 12.83 |
| CDX80750 | Canola | nucleus | 23.53 | 12.7 |
| CDY15205 | Canola | nucleus | 25.82 | 12.66 |
| CDY61862 | Canola | nucleus | 23.2 | 12.12 |
| CDY41563 | Canola | nucleus | 23.86 | 9.71 |
| CDY64825 | Canola | cytosol, nucleus, plastid | 1.96 | 3.82 |
| CDX80052 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.2 | MapMan:27.1.6.2 | GO:A0A078ICE0 | UniProt:A0A078ICE0 | EnsemblPlants:CDY48515 |
| ProteinID:CDY48515 | ProteinID:CDY48515.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00091220001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 |
| PANTHER:PTHR12802 | PANTHER:PTHR12802:SF83 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 |
| UniParc:UPI0004EE2387 | SEG:seg | : | : | : | : |
Description
BnaA09g00080DBnaA09g00080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ICE0]
Coordinates
chrLK032776:+:101939..103734
Molecular Weight (calculated)
34236.6 Da
IEP (calculated)
10.102
GRAVY (calculated)
-0.644
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSLNARPAP FLDPVSVSFD SMASDSSDGF GFTPIATTPV TGRRDTASYK IRKPYTIKKS RENWTEQEHD KFLEALHLFD RDWKKIEAFV GSKTVVQIRS
101: HAQKYFLKVQ KSGANEHLPP PRPKRKARHP YPQKASKNVA LPSHAIGSIP ASNAPLLQPA YLYSSSDSQY PASSSSSLNH ESTNLPKPVI QEEPGVSATA
201: LPKNRCYSTS NKEVKPNLPT VTEPNNEEQS CEKPHRVMPN FAQVYRFIGS VFDPNTSGHI QRLKQMDPIN IETVLLLMRN LSVNLTSPEF TEQRKLISSY
301: SSKALK
101: HAQKYFLKVQ KSGANEHLPP PRPKRKARHP YPQKASKNVA LPSHAIGSIP ASNAPLLQPA YLYSSSDSQY PASSSSSLNH ESTNLPKPVI QEEPGVSATA
201: LPKNRCYSTS NKEVKPNLPT VTEPNNEEQS CEKPHRVMPN FAQVYRFIGS VFDPNTSGHI QRLKQMDPIN IETVLLLMRN LSVNLTSPEF TEQRKLISSY
301: SSKALK
001: MVSVNPRPKG FPVFDSSNMS LPSSDGFGSI PATGRTSTVS FSEDPTTKIR KPYTIKKSRE NWTDQEHDKF LEALHLFDRD WKKIEAFVGS KTVVQIRSHA
101: QKYFLKVQKS GANEHLPPPR PKRKASHPYP IKAPKNVAYT SLPSSSTLPL LEPGYLYSSD SKSLMGNQAV CASTSSSWNH ESTNLPKPVI EEEPGVSATA
201: PLPNNRCRQE DTERVRAVTK PNNEESCEKP HRVMPNFAEV YSFIGSVFDP NTSGHLQRLK QMDPINMETV LLLMQNLSVN LTSPEFAEQR RLISSYSAKA
301: LK
101: QKYFLKVQKS GANEHLPPPR PKRKASHPYP IKAPKNVAYT SLPSSSTLPL LEPGYLYSSD SKSLMGNQAV CASTSSSWNH ESTNLPKPVI EEEPGVSATA
201: PLPNNRCRQE DTERVRAVTK PNNEESCEKP HRVMPNFAEV YSFIGSVFDP NTSGHLQRLK QMDPINMETV LLLMQNLSVN LTSPEFAEQR RLISSYSAKA
301: LK
Arabidopsis Description
RVE5Protein REVEILLE 5 [Source:UniProtKB/Swiss-Prot;Acc:C0SVG5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.