Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY26997 | Canola | nucleus | 95.64 | 95.64 |
| Bra039503.1-P | Field mustard | nucleus | 95.33 | 91.89 |
| AT5G37260.1 | Thale cress | nucleus | 76.01 | 85.02 |
| CDY16939 | Canola | nucleus | 38.32 | 41.0 |
| KRH20042 | Soybean | nucleus | 33.64 | 37.63 |
| CDX78737 | Canola | nucleus | 38.94 | 34.25 |
| CDY02714 | Canola | nucleus | 39.25 | 34.15 |
| KRG98008 | Soybean | nucleus | 38.32 | 34.07 |
| CDX70747 | Canola | nucleus | 38.01 | 33.8 |
| CDX85462 | Canola | nucleus | 38.94 | 33.51 |
| CDX69388 | Canola | nucleus | 38.94 | 33.42 |
| CDY26169 | Canola | nucleus | 30.53 | 31.21 |
| KRH72927 | Soybean | nucleus | 38.32 | 28.21 |
| KRH17280 | Soybean | nucleus | 38.01 | 27.98 |
| CDY19206 | Canola | nucleus | 31.15 | 27.62 |
| Solyc02g036370.2.1 | Tomato | nucleus | 38.63 | 26.72 |
| VIT_04s0079g00410.t01 | Wine grape | nucleus | 39.88 | 26.72 |
| CDX90039 | Canola | plastid | 22.12 | 26.3 |
| PGSC0003DMT400055263 | Potato | nucleus | 38.94 | 26.26 |
| CDY15171 | Canola | nucleus | 21.5 | 25.56 |
| CDY07188 | Canola | nucleus | 23.68 | 25.5 |
| CDY41299 | Canola | nucleus | 21.81 | 24.65 |
| CDY48515 | Canola | nucleus | 23.36 | 24.51 |
| CDX80840 | Canola | nucleus | 20.56 | 24.44 |
| CDY52837 | Canola | nucleus | 21.81 | 22.88 |
| CDY11228 | Canola | nucleus | 19.63 | 22.83 |
| CDX70341 | Canola | nucleus | 20.25 | 22.81 |
| CDY56155 | Canola | nucleus | 22.74 | 22.6 |
| CDY41598 | Canola | nucleus | 20.56 | 21.93 |
| CDY44719 | Canola | nucleus | 20.56 | 21.71 |
| CDY51831 | Canola | vacuole | 23.05 | 21.26 |
| CDY27841 | Canola | nucleus | 17.76 | 19.93 |
| CDX80051 | Canola | nucleus | 29.59 | 17.21 |
| CDX80750 | Canola | nucleus | 30.22 | 17.11 |
| CDX90004 | Canola | nucleus | 32.09 | 16.94 |
| CDY61862 | Canola | nucleus | 30.22 | 16.55 |
| CDY15205 | Canola | nucleus | 32.09 | 16.51 |
| CDY41563 | Canola | nucleus | 29.91 | 12.77 |
| CDY10419 | Canola | nucleus | 20.56 | 12.36 |
| CDY64825 | Canola | cytosol, nucleus, plastid | 4.67 | 9.55 |
| CDX80052 | Canola | cytosol | 1.25 | 1.85 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.2 | GO:A0A078HLV3 | UniProt:A0A078HLV3 | EnsemblPlants:CDY38566 | ProteinID:CDY38566 |
| ProteinID:CDY38566.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00066237001 | InterPro:Homeobox-like_sf |
| InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR12802 |
| PANTHER:PTHR12802:SF60 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0004EF45BB |
| SEG:seg | : | : | : | : | : |
Description
BnaA05g12950DBnaA05g12950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HLV3]
Coordinates
chrLK032426:-:231278..233346
Molecular Weight (calculated)
35971.3 Da
IEP (calculated)
8.209
GRAVY (calculated)
-0.693
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQNLISDES FSSTTMVMQE HCESLCDRAS DELIISSTDA FCLKTRKPYT ITKQREKWTE AEHEKFVEAL KLYGRAWRRI EEHVGTKTAV QIRSHAQKFF
101: TKVARDCGVT SEKSIEIPPP RPKRKPMHPY PRKLVIPDAK EMAYAGKLVP DEDSRSPTSV LSAHGSDGLG SIGSNSPNSS SADYQVHELS SHTEESLSPE
201: AETKQQSLKL FGKTFVVGDY NSWTSSNDSE DVKKKSDLET QSVRCTSSSS SSSENAETEL TQQVVVVVVS EEFKRSERSA FSQLKSSAIA MKNMKGFMPY
301: KKRMKVEGNT NSLVKTSYPI W
101: TKVARDCGVT SEKSIEIPPP RPKRKPMHPY PRKLVIPDAK EMAYAGKLVP DEDSRSPTSV LSAHGSDGLG SIGSNSPNSS SADYQVHELS SHTEESLSPE
201: AETKQQSLKL FGKTFVVGDY NSWTSSNDSE DVKKKSDLET QSVRCTSSSS SSSENAETEL TQQVVVVVVS EEFKRSERSA FSQLKSSAIA MKNMKGFMPY
301: KKRMKVEGNT NSLVKTSYPI W
001: MAMQERCESL CSDELISSSD AFYLKTRKPY TITKQREKWT EAEHEKFVEA LKLYGRAWRR IEEHVGTKTA VQIRSHAQKF FTKVARDFGV SSESIEIPPP
101: RPKRKPMHPY PRKLVIPDAK EMVYAELTGS KLIQDEDNRS PTSVLSAHGS DGLGSIGSNS PNSSSAELSS HTEESLSLEA ETKQSLKLFG KTFVVGDYNS
201: SMSCDDSEDG KKKLYSETQS LQCSSSTSEN AETEVVVSEF KRSERSAFSQ LKSSVTEMNN MRGFMPYKKR VKVEENIDNV KLSYPLW
101: RPKRKPMHPY PRKLVIPDAK EMVYAELTGS KLIQDEDNRS PTSVLSAHGS DGLGSIGSNS PNSSSAELSS HTEESLSLEA ETKQSLKLFG KTFVVGDYNS
201: SMSCDDSEDG KKKLYSETQS LQCSSSTSEN AETEVVVSEF KRSERSAFSQ LKSSVTEMNN MRGFMPYKKR VKVEENIDNV KLSYPLW
Arabidopsis Description
RVE2Protein REVEILLE 2 [Source:UniProtKB/Swiss-Prot;Acc:F4K5X6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.