CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH17280	Soybean	nucleus	89.91	89.91
KRH20042	Soybean	nucleus	46.1	70.03
KRG98008	Soybean	nucleus	54.59	65.93
VIT_04s0079g00410.t01	Wine grape	nucleus	50.92	46.35
AT5G37260.1	Thale cress	nucleus	28.44	43.21
Solyc02g036370.2.1	Tomato	nucleus	41.05	38.58
PGSC0003DMT400055263	Potato	nucleus	41.97	38.45
CDY38566	Canola	nucleus	28.21	38.32
CDY26997	Canola	nucleus	27.75	37.69
Bra039503.1-P	Field mustard	nucleus	27.75	36.34
KRH38938	Soybean	nucleus	34.17	31.97
KRH09476	Soybean	nucleus	33.72	30.82
KRH08856	Soybean	nucleus	18.12	26.25
KRH40382	Soybean	nucleus	17.2	26.13
KRH35235	Soybean	nucleus	18.35	25.64
KRH00849	Soybean	nucleus	17.66	25.0
KRG91589	Soybean	nucleus	18.35	24.32
KRH32383	Soybean	plastid	16.28	24.15
KRG95914	Soybean	nucleus	15.6	23.53
KRH67632	Soybean	nucleus	16.05	23.41
KRH48063	Soybean	nucleus	17.43	22.96
KRH19794	Soybean	nucleus	15.83	22.92
KRH38371	Soybean	nucleus	18.35	22.66
KRH06589	Soybean	nucleus	17.2	22.59
KRH68974	Soybean	nucleus	28.67	16.71
KRH06339	Soybean	nucleus	28.21	16.4
KRH47757	Soybean	nucleus	27.75	16.13
KRG97259	Soybean	nucleus, plastid	28.9	15.38

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100785040	MapMan:15.5.2.2	EMBL:ACUP02001254	EnsemblPlantsGene:GLYMA_02G241000	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	UniProt:I1JHS3	InterPro:IPR017930	EnsemblPlants:KRH72927
ProteinID:KRH72927	ProteinID:KRH72927.1	EMBL:KT031181	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249
PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF60	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689
TIGRFAMs:TIGR01557	UniParc:UPI0002337A6A	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:42929621..42932278

Molecular Weight (calculated)

48805.4 Da

IEP (calculated)

8.224

GRAVY (calculated)

-0.769

Length

436 amino acids

Sequence
(BLAST)

001: MAIQSQNAFT RSRGGLPIGD GISLNSGVHP VADIPLHDQF SCGNDYALKV RKPYTITKQR ERWTDEEHKK FLEALKLYGR AWRRIEEHVG TKTAVQIRSH
101: AQKFFSKILR ESSRNSTTLE ESIEIPPPRP KRKPIHPYPR KLVEIPKTEI SNSELPLRSN SLKPSDFGQE NNSPKSVLST VVSETLGSSD SDTPTRCLSP
201: TSSISDVPTN RFPLAEPKTS FEEEGSPPSS AHDKQPPVKL EFFHKESVST KDDATEESSG RTLKLFGTTL LITDTCKPSS PTMEPWKPTP AAAMYLMQLQ
301: NGCSDITEGP ASIVPWWSLP HNTPFMPLHK EPKGNHIYSN LGEFVHKEVQ KEGSWTGSNT SSINDGDNIE KSDDQAKSHV HCFSKSEISS ISELRVRPKT
401: CGKGFVPCKR RMAERESKYS SICYEEREEQ GIKLSL

Best Arabidopsis Sequence Match ( AT5G17300.1 )
(BLAST)

001: MASSPLTANV QGTNASLRNR DEETADKQIQ FNDQSFGGND YAPKVRKPYT ITKERERWTD EEHKKFVEAL KLYGRAWRRI EEHVGSKTAV QIRSHAQKFF
101: SKVAREATGG DGSSVEPIVI PPPRPKRKPA HPYPRKFGNE ADQTSRSVSP SERDTQSPTS VLSTVGSEAL CSLDSSSPNR SLSPVSSASP PAALTTTANA
201: PEELETLKLE LFPSERLLNR ESSIKEPTKQ SLKLFGKTVL VSDSGMSSSL TTSTYCKSPI QPLPRKLSSS KTLPIIRNSQ EELLSCWIQV PLKQEDVENR
301: CLDSGKAVQN EGSSTGSNTG SVDDTGHTEK TTEPETMLCQ WEFKPSERSA FSELRRTNSE SNSRGFGPYK KRKMVTEEEE HEIHLHL

Arabidopsis Description

RVE1Protein REVEILLE 1 [Source:UniProtKB/Swiss-Prot;Acc:F4KGY6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.