Factsheet for Bra039503.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38566	Canola	nucleus	91.89	95.33
AT5G37260.1	Thale cress	nucleus	72.37	83.97
KRH20042	Soybean	nucleus	31.83	36.93
Bra023610.1-P	Field mustard	nucleus	38.44	34.5
Bra008563.1-P	Field mustard	nucleus	36.34	34.08
Bra006394.1-P	Field mustard	nucleus	36.94	33.79
KRG98008	Soybean	nucleus	36.34	33.52
Bra025914.1-P	Field mustard	nucleus	29.13	29.04
KRH72927	Soybean	nucleus	36.34	27.75
Bra024430.1-P	Field mustard	mitochondrion, nucleus	17.72	27.57
KRH17280	Soybean	nucleus	36.04	27.52
VIT_04s0079g00410.t01	Wine grape	nucleus	38.44	26.72
Solyc02g036370.2.1	Tomato	nucleus	36.94	26.51
PGSC0003DMT400055263	Potato	nucleus	37.24	26.05
Bra033257.1-P	Field mustard	plastid	21.02	25.93
Bra034074.1-P	Field mustard	nucleus	19.52	24.71
Bra003117.1-P	Field mustard	nucleus	21.02	22.88
Bra005751.1-P	Field mustard	nucleus	18.92	22.26
Bra029111.1-P	Field mustard	nucleus	21.32	22.19
Bra029778.1-P	Field mustard	nucleus	19.52	21.38
Bra037365.1-P	Field mustard	nucleus	21.32	20.94
Bra009562.1-P	Field mustard	nucleus	18.92	20.19
Bra033291.1-P	Field mustard	nucleus	31.23	17.13
Bra004503.1-P	Field mustard	nucleus	28.23	17.03
Bra030496.1-P	Field mustard	nucleus	28.83	16.38
Bra004502.1-P	Field mustard	cytosol	1.2	1.85

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	EnsemblPlantsGene:Bra039503	EnsemblPlants:Bra039503.1	EnsemblPlants:Bra039503.1-P	GO:GO:0000003
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006950
GO:GO:0007275	GO:GO:0007623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628
GO:GO:0009651	GO:GO:0009719	GO:GO:0009723	GO:GO:0009733	GO:GO:0009737	GO:GO:0009739
GO:GO:0009751	GO:GO:0009753	GO:GO:0009791	GO:GO:0009845	GO:GO:0009908	GO:GO:0009909
GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M4FEI2	InterPro:Myb_dom	InterPro:Myb_dom_plants
PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF60	InterPro:SANT/Myb	SMART:SM00717
SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI00025474FB	SEG:seg	:	:

Description

AT5G37260 (E=1e-090) RVE2, CIR1 | RVE2 (REVEILLE 2); DNA binding / transcription factor

Coordinates

chrA05:-:9580938..9582487

Molecular Weight (calculated)

37400.1 Da

IEP (calculated)

8.550

GRAVY (calculated)

-0.644

Length

333 amino acids

Sequence
(BLAST)

001: MVYVGEILEL KNIRLSQVNC VIDKASLWDV KEHCESLCDR ASDELIISST DAFCLKTRKP YTITKQREKW TEAEHEKFVE ALKLYGRAWR RIEEHVGTKT
101: AVQIRSHAQK FFTKVARDCG VTSEKSIEIP PPRPKRKPMH PYPRKLVIPD AKEMAYAGKL VPDEDSRSPT SVLSAHGSDG LGSIGSNSPN SSSADYQVHE
201: LSSHTEESLS PEAETKQQSL KLFGKTFVVG DYNSWTSSND SEDVKKKSDL ETQSVRCTSS SSSSSENAET ELTQQVVVVV VSEEFKRSER SAFSQLKSSA
301: IAMKNMKGFM PYKKRMKVEG NTNSLVKTSY PIW

Best Arabidopsis Sequence Match ( AT5G37260.1 )
(BLAST)

001: MAMQERCESL CSDELISSSD AFYLKTRKPY TITKQREKWT EAEHEKFVEA LKLYGRAWRR IEEHVGTKTA VQIRSHAQKF FTKVARDFGV SSESIEIPPP
101: RPKRKPMHPY PRKLVIPDAK EMVYAELTGS KLIQDEDNRS PTSVLSAHGS DGLGSIGSNS PNSSSAELSS HTEESLSLEA ETKQSLKLFG KTFVVGDYNS
201: SMSCDDSEDG KKKLYSETQS LQCSSSTSEN AETEVVVSEF KRSERSAFSQ LKSSVTEMNN MRGFMPYKKR VKVEENIDNV KLSYPLW

Arabidopsis Description

RVE2Protein REVEILLE 2 [Source:UniProtKB/Swiss-Prot;Acc:F4K5X6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.