Factsheet for Solyc02g036370.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400055263	Potato	nucleus	90.3	88.03
CDY16939	Canola	nucleus	32.54	50.33
KRH20042	Soybean	nucleus	28.45	45.99
Bra023610.1-P	Field mustard	nucleus	36.21	45.28
CDY02714	Canola	nucleus	35.56	44.72
VIT_04s0079g00410.t01	Wine grape	nucleus	45.69	44.26
CDX69388	Canola	nucleus	35.56	44.12
Bra008563.1-P	Field mustard	nucleus	33.62	43.94
CDX85462	Canola	nucleus	34.91	43.43
AT5G17300.1	Thale cress	nucleus	35.99	43.15
CDX70747	Canola	nucleus	33.19	42.66
KRG98008	Soybean	nucleus	33.19	42.66
AT5G37260.1	Thale cress	nucleus	26.29	42.51
KRH17280	Soybean	nucleus	39.87	42.43
CDX78737	Canola	nucleus	32.97	41.92
Bra006394.1-P	Field mustard	nucleus	32.76	41.76
KRH72927	Soybean	nucleus	38.58	41.05
CDY26997	Canola	nucleus	26.94	38.94
CDY38566	Canola	nucleus	26.72	38.63
Bra039503.1-P	Field mustard	nucleus	26.51	36.94
Bra024430.1-P	Field mustard	mitochondrion, nucleus	15.95	34.58
Solyc03g098320.2.1	Tomato	nucleus	31.47	31.88
Solyc06g036300.2.1	Tomato	nucleus, plastid	17.46	26.91
Solyc10g084370.1.1	Tomato	nucleus	16.81	26.35
Solyc01g095030.2.1	Tomato	nucleus	17.46	24.47
Solyc10g005080.2.1	Tomato	nucleus	28.45	17.32

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf
InterPro:IPR017930	UniProt:K4B5T0	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294
PANTHER:PTHR12802	PANTHER:PTHR12802:SF60	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	EnsemblPlantsGene:Solyc02g036370.2
EnsemblPlants:Solyc02g036370.2.1	TIGRFAMs:TIGR01557	UniParc:UPI0002767737	SEG:seg	:	:

Description

No Description!

Coordinates

chr2:-:30601627..30604296

Molecular Weight (calculated)

50963.5 Da

IEP (calculated)

6.715

GRAVY (calculated)

-0.716

Length

464 amino acids

Sequence
(BLAST)

001: MTIGDQSESD SILPCRNRMS VDVGAPSPRS IQMDEQVNPG EEYAPKIRKP YTISKQRERW SEEEHKKFLE ALKLHGRAWR RIEEHVGTKT AVQIRSHAQK
101: FFSKVVRESS NGDASSVKSI EIPPPRPKRK PMHPYPRKMA TPLKSGTLAS EKLNRSGSPD LCLSEPENQS PTSVLSTLGS DAFGTVDSTK PSEQSSPVSS
201: AVAENSGDLV LSEPFDLVVE ESRSSPARAY ATSNPANQAC VKLELFPEDN DFVKEGSDEA SSTQCLKLFG KTVLVTDAHM PPTDETLTRS SFPAKYLPWD
301: SECPQSTFSI VPPTPSYYFT TPNGSSGPNQ SGVATTHLPW GSSCAVPCTQ VHSPIPMKGR PLFNDRYLEG KETQKEGSST GSNAESVDAE LSGEKNMEIE
401: AQSSRNVVEE SVRASVPSLF ERRANSTKRV KGFVPYKRCL AERGVSSSTL TGEEREEQRT RLCL

Best Arabidopsis Sequence Match ( AT5G17300.1 )
(BLAST)

001: MASSPLTANV QGTNASLRNR DEETADKQIQ FNDQSFGGND YAPKVRKPYT ITKERERWTD EEHKKFVEAL KLYGRAWRRI EEHVGSKTAV QIRSHAQKFF
101: SKVAREATGG DGSSVEPIVI PPPRPKRKPA HPYPRKFGNE ADQTSRSVSP SERDTQSPTS VLSTVGSEAL CSLDSSSPNR SLSPVSSASP PAALTTTANA
201: PEELETLKLE LFPSERLLNR ESSIKEPTKQ SLKLFGKTVL VSDSGMSSSL TTSTYCKSPI QPLPRKLSSS KTLPIIRNSQ EELLSCWIQV PLKQEDVENR
301: CLDSGKAVQN EGSSTGSNTG SVDDTGHTEK TTEPETMLCQ WEFKPSERSA FSELRRTNSE SNSRGFGPYK KRKMVTEEEE HEIHLHL

Arabidopsis Description

RVE1Protein REVEILLE 1 [Source:UniProtKB/Swiss-Prot;Acc:F4KGY6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.