Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69388 | Canola | nucleus | 96.0 | 77.01 |
| CDY02714 | Canola | nucleus | 84.0 | 68.29 |
| CDX70747 | Canola | nucleus | 81.0 | 67.31 |
| CDX85462 | Canola | nucleus | 82.67 | 66.49 |
| AT5G17300.1 | Thale cress | nucleus | 82.67 | 64.08 |
| CDX78737 | Canola | nucleus | 76.0 | 62.47 |
| CDY38566 | Canola | nucleus | 41.0 | 38.32 |
| CDY26997 | Canola | nucleus | 40.33 | 37.69 |
| CDY26169 | Canola | nucleus | 35.67 | 34.08 |
| Solyc02g036370.2.1 | Tomato | nucleus | 50.33 | 32.54 |
| PGSC0003DMT400055263 | Potato | nucleus | 51.0 | 32.14 |
| CDY19206 | Canola | nucleus | 37.0 | 30.66 |
| CDX90039 | Canola | plastid | 23.0 | 25.56 |
| CDY07188 | Canola | nucleus | 25.33 | 25.5 |
| CDY41299 | Canola | nucleus | 23.67 | 25.0 |
| CDX80840 | Canola | nucleus | 22.33 | 24.81 |
| CDY15171 | Canola | nucleus | 22.33 | 24.81 |
| CDY48515 | Canola | nucleus | 24.33 | 23.86 |
| CDY41598 | Canola | nucleus | 23.67 | 23.59 |
| CDY11228 | Canola | nucleus | 21.67 | 23.55 |
| CDY44719 | Canola | nucleus | 23.33 | 23.03 |
| CDY52837 | Canola | nucleus | 23.33 | 22.88 |
| CDX70341 | Canola | nucleus | 21.67 | 22.81 |
| CDY56155 | Canola | nucleus | 24.0 | 22.29 |
| CDY51831 | Canola | vacuole | 24.0 | 20.69 |
| CDY27841 | Canola | nucleus | 19.33 | 20.28 |
| CDX80051 | Canola | nucleus | 32.33 | 17.57 |
| CDX90004 | Canola | nucleus | 33.67 | 16.61 |
| CDX80750 | Canola | nucleus | 30.67 | 16.23 |
| CDY15205 | Canola | nucleus | 33.33 | 16.03 |
| CDY61862 | Canola | nucleus | 30.67 | 15.7 |
| CDY41563 | Canola | nucleus | 32.0 | 12.77 |
| CDY10419 | Canola | nucleus | 21.33 | 11.98 |
| CDY64825 | Canola | cytosol, nucleus, plastid | 5.0 | 9.55 |
| CDX80052 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.2 | GO:A0A078FV64 | UniProt:A0A078FV64 | EnsemblPlants:CDY16939 | ProteinID:CDY16939 |
| ProteinID:CDY16939.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00094861001 | InterPro:Homeobox-like_sf |
| InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR12802 |
| PANTHER:PTHR12802:SF60 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0004EEB369 |
| SEG:seg | : | : | : | : | : |
Description
BnaC09g40660DBnaC09g40660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FV64]
Coordinates
chrLK032068:+:478334..480409
Molecular Weight (calculated)
33036.4 Da
IEP (calculated)
9.583
GRAVY (calculated)
-0.932
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSPLTTNV QGAKTTEKPK IQFSDQEGND YAPKVRKPYT ITKERERWTD EEHNKFVEAL KLHGRAWRKI EEHVGTKTAV QIRSHAQKFF SKVAKEASGG
101: NGSSLEPIVI PPPRPKRKPS HPYPRKLGNE GDQASRSVSP SERDNGSPTS VLSTVGSEAL GSSDSHSPNR SLSPLELFPR ESLVKEPTKQ SLRLFGNTVL
201: VSDSGVSSSL TTCSDSEKAV QNEGSSTGSN TGSVDDTGHT DKSSEPHETM VCRWELKPSE RSAFSELRRA NSESNSRGFG PYKKRKMVIE AEQEQIRLCL
101: NGSSLEPIVI PPPRPKRKPS HPYPRKLGNE GDQASRSVSP SERDNGSPTS VLSTVGSEAL GSSDSHSPNR SLSPLELFPR ESLVKEPTKQ SLRLFGNTVL
201: VSDSGVSSSL TTCSDSEKAV QNEGSSTGSN TGSVDDTGHT DKSSEPHETM VCRWELKPSE RSAFSELRRA NSESNSRGFG PYKKRKMVIE AEQEQIRLCL
001: MAMQERCESL CSDELISSSD AFYLKTRKPY TITKQREKWT EAEHEKFVEA LKLYGRAWRR IEEHVGTKTA VQIRSHAQKF FTKVARDFGV SSESIEIPPP
101: RPKRKPMHPY PRKLVIPDAK EMVYAELTGS KLIQDEDNRS PTSVLSAHGS DGLGSIGSNS PNSSSAELSS HTEESLSLEA ETKQSLKLFG KTFVVGDYNS
201: SMSCDDSEDG KKKLYSETQS LQCSSSTSEN AETEVVVSEF KRSERSAFSQ LKSSVTEMNN MRGFMPYKKR VKVEENIDNV KLSYPLW
101: RPKRKPMHPY PRKLVIPDAK EMVYAELTGS KLIQDEDNRS PTSVLSAHGS DGLGSIGSNS PNSSSAELSS HTEESLSLEA ETKQSLKLFG KTFVVGDYNS
201: SMSCDDSEDG KKKLYSETQS LQCSSSTSEN AETEVVVSEF KRSERSAFSQ LKSSVTEMNN MRGFMPYKKR VKVEENIDNV KLSYPLW
Arabidopsis Description
RVE2Protein REVEILLE 2 [Source:UniProtKB/Swiss-Prot;Acc:F4K5X6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.