Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023610.1-P | Field mustard | nucleus | 94.04 | 93.53 |
| CDX85462 | Canola | nucleus | 92.41 | 91.42 |
| CDY16939 | Canola | nucleus | 68.29 | 84.0 |
| CDX69388 | Canola | nucleus | 85.09 | 83.96 |
| AT5G17300.1 | Thale cress | nucleus | 84.55 | 80.62 |
| CDX70747 | Canola | nucleus | 78.05 | 79.78 |
| CDX78737 | Canola | nucleus | 76.15 | 76.99 |
| CDY38566 | Canola | nucleus | 34.15 | 39.25 |
| CDY26997 | Canola | nucleus | 34.15 | 39.25 |
| Solyc02g036370.2.1 | Tomato | nucleus | 44.72 | 35.56 |
| CDY26169 | Canola | nucleus | 30.08 | 35.35 |
| PGSC0003DMT400055263 | Potato | nucleus | 45.53 | 35.29 |
| CDY19206 | Canola | nucleus | 31.71 | 32.32 |
| CDX80840 | Canola | nucleus | 19.24 | 26.3 |
| CDX90039 | Canola | plastid | 18.97 | 25.93 |
| CDY07188 | Canola | nucleus | 20.87 | 25.84 |
| CDY41299 | Canola | nucleus | 19.51 | 25.35 |
| CDY15171 | Canola | nucleus | 18.16 | 24.81 |
| CDY11228 | Canola | nucleus | 18.43 | 24.64 |
| CDY48515 | Canola | nucleus | 19.78 | 23.86 |
| CDY41598 | Canola | nucleus | 18.97 | 23.26 |
| CDY52837 | Canola | nucleus | 19.24 | 23.2 |
| CDX70341 | Canola | nucleus | 17.89 | 23.16 |
| CDY44719 | Canola | nucleus | 18.7 | 22.7 |
| CDY56155 | Canola | nucleus | 19.78 | 22.6 |
| CDY27841 | Canola | nucleus | 16.26 | 20.98 |
| CDY51831 | Canola | vacuole | 19.78 | 20.98 |
| CDX80051 | Canola | nucleus | 27.37 | 18.3 |
| CDX80750 | Canola | nucleus | 27.1 | 17.64 |
| CDX90004 | Canola | nucleus | 29.0 | 17.6 |
| CDY15205 | Canola | nucleus | 28.73 | 16.99 |
| CDY61862 | Canola | nucleus | 26.56 | 16.72 |
| CDY41563 | Canola | nucleus | 26.83 | 13.16 |
| CDY10419 | Canola | nucleus | 17.89 | 12.36 |
| CDY64825 | Canola | cytosol, nucleus, plastid | 4.61 | 10.83 |
| CDX80052 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.2 | GO:A0A078EPW3 | EnsemblPlants:CDY02714 | ProteinID:CDY02714 | ProteinID:CDY02714.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00114866001 | InterPro:Homeobox-like_sf |
| InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR12802 |
| PANTHER:PTHR12802:SF60 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0004EE2A38 |
| SEG:seg | : | : | : | : | : |
Description
BnaC02g07210D
Coordinates
chrLK031936:+:1051545..1053635
Molecular Weight (calculated)
41336.3 Da
IEP (calculated)
7.121
GRAVY (calculated)
-0.865
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSPLTANV QGDDNRVEET AEIQLNDQVF DYAPKVRKPY TITKERERWT DEEHNKFVEA LKLYGRAWRK IEEHVGTKTA VQIRSHAQKF FSKVARESSG
101: GNGNSLEPIV IPPPRPKRRP MHPYPRKLGN EGDQTSRSVS PSERDNRSLT SVLSTVGSEA FGSSDSHSPN RSLSPVSSAS PPAALVTTAN APEELETLKL
201: ELFPAERLLN REEPKKQSLK LFGKTVLVSD SDMSSSPTTY CKSPIQPLPR KLSRLETFPV VINPQEELLS CWIQVPPKQE ECLDSEKGVQ NEGSSTGSNT
301: GSVDDTGHTE KSSEPETMVC PREFKPSEKS AFSELRRRNS ESNSRGFGPY KKRKMVIEAE EEQEIRFYL
101: GNGNSLEPIV IPPPRPKRRP MHPYPRKLGN EGDQTSRSVS PSERDNRSLT SVLSTVGSEA FGSSDSHSPN RSLSPVSSAS PPAALVTTAN APEELETLKL
201: ELFPAERLLN REEPKKQSLK LFGKTVLVSD SDMSSSPTTY CKSPIQPLPR KLSRLETFPV VINPQEELLS CWIQVPPKQE ECLDSEKGVQ NEGSSTGSNT
301: GSVDDTGHTE KSSEPETMVC PREFKPSEKS AFSELRRRNS ESNSRGFGPY KKRKMVIEAE EEQEIRFYL
001: MASSPLTANV QGTNASLRNR DEETADKQIQ FNDQSFGGND YAPKVRKPYT ITKERERWTD EEHKKFVEAL KLYGRAWRRI EEHVGSKTAV QIRSHAQKFF
101: SKVAREATGG DGSSVEPIVI PPPRPKRKPA HPYPRKFGNE ADQTSRSVSP SERDTQSPTS VLSTVGSEAL CSLDSSSPNR SLSPVSSASP PAALTTTANA
201: PEELETLKLE LFPSERLLNR ESSIKEPTKQ SLKLFGKTVL VSDSGMSSSL TTSTYCKSPI QPLPRKLSSS KTLPIIRNSQ EELLSCWIQV PLKQEDVENR
301: CLDSGKAVQN EGSSTGSNTG SVDDTGHTEK TTEPETMLCQ WEFKPSERSA FSELRRTNSE SNSRGFGPYK KRKMVTEEEE HEIHLHL
101: SKVAREATGG DGSSVEPIVI PPPRPKRKPA HPYPRKFGNE ADQTSRSVSP SERDTQSPTS VLSTVGSEAL CSLDSSSPNR SLSPVSSASP PAALTTTANA
201: PEELETLKLE LFPSERLLNR ESSIKEPTKQ SLKLFGKTVL VSDSGMSSSL TTSTYCKSPI QPLPRKLSSS KTLPIIRNSQ EELLSCWIQV PLKQEDVENR
301: CLDSGKAVQN EGSSTGSNTG SVDDTGHTEK TTEPETMLCQ WEFKPSERSA FSELRRTNSE SNSRGFGPYK KRKMVTEEEE HEIHLHL
Arabidopsis Description
RVE1Protein REVEILLE 1 [Source:UniProtKB/Swiss-Prot;Acc:F4KGY6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.