Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY02714 | Canola | nucleus | 80.62 | 84.55 |
| CDX85462 | Canola | nucleus | 80.62 | 83.65 |
| Bra023610.1-P | Field mustard | nucleus | 80.1 | 83.56 |
| CDY16939 | Canola | nucleus | 64.08 | 82.67 |
| CDX70747 | Canola | nucleus | 76.23 | 81.72 |
| Bra008563.1-P | Field mustard | nucleus | 74.68 | 81.41 |
| CDX69388 | Canola | nucleus | 78.04 | 80.75 |
| Bra006394.1-P | Field mustard | nucleus | 75.71 | 80.49 |
| CDX78737 | Canola | nucleus | 75.45 | 80.0 |
| AT5G37260.1 | Thale cress | nucleus | 34.11 | 45.99 |
| Solyc02g036370.2.1 | Tomato | nucleus | 43.15 | 35.99 |
| PGSC0003DMT400055263 | Potato | nucleus | 44.19 | 35.92 |
| AT3G10113.1 | Thale cress | nucleus | 29.46 | 33.93 |
| AT1G18330.2 | Thale cress | nucleus | 30.75 | 31.99 |
| AT3G09600.7 | Thale cress | nucleus | 18.6 | 24.16 |
| AT1G01520.3 | Thale cress | plastid | 17.83 | 24.04 |
| AT5G02840.1 | Thale cress | nucleus | 18.09 | 23.89 |
| AT4G01280.2 | Thale cress | nucleus | 18.6 | 23.76 |
| AT5G52660.2 | Thale cress | nucleus | 19.64 | 22.96 |
| AT2G46830.1 | Thale cress | nucleus | 27.13 | 17.27 |
| AT1G01060.7 | Thale cress | nucleus | 26.87 | 16.12 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.2 | EntrezGene:831595 | ProteinID:AED92410.1 | EMBL:AF378860 | ArrayExpress:AT5G17300 |
| EnsemblPlantsGene:AT5G17300 | RefSeq:AT5G17300 | TAIR:AT5G17300 | RefSeq:AT5G17300-TAIR-G | EnsemblPlants:AT5G17300.1 | TAIR:AT5G17300.1 |
| EMBL:AY050467 | Unigene:At.21718 | ProteinID:BAB10517.1 | UniProt:F4KGY6 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0007623 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009734 |
| GO:GO:0009851 | GO:GO:0009987 | GO:GO:0010600 | GO:GO:0048511 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| InterPro:Myb_dom | InterPro:Myb_dom_plants | RefSeq:NP_568344.2 | PFAM:PF00249 | PO:PO:0000013 | PO:PO:0000016 |
| PO:PO:0000025 | PO:PO:0000037 | PO:PO:0000039 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0003011 |
| PO:PO:0004507 | PO:PO:0005660 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020003 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0020149 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS51294 | PANTHER:PTHR12802 | PANTHER:PTHR12802:SF60 | Symbol:RVE1 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI000034F224 | SEG:seg | : |
Description
RVE1Protein REVEILLE 1 [Source:UniProtKB/Swiss-Prot;Acc:F4KGY6]
Coordinates
chr5:-:5690226..5692992
Molecular Weight (calculated)
42983.1 Da
IEP (calculated)
8.216
GRAVY (calculated)
-0.853
Length
387 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSPLTANV QGTNASLRNR DEETADKQIQ FNDQSFGGND YAPKVRKPYT ITKERERWTD EEHKKFVEAL KLYGRAWRRI EEHVGSKTAV QIRSHAQKFF
101: SKVAREATGG DGSSVEPIVI PPPRPKRKPA HPYPRKFGNE ADQTSRSVSP SERDTQSPTS VLSTVGSEAL CSLDSSSPNR SLSPVSSASP PAALTTTANA
201: PEELETLKLE LFPSERLLNR ESSIKEPTKQ SLKLFGKTVL VSDSGMSSSL TTSTYCKSPI QPLPRKLSSS KTLPIIRNSQ EELLSCWIQV PLKQEDVENR
301: CLDSGKAVQN EGSSTGSNTG SVDDTGHTEK TTEPETMLCQ WEFKPSERSA FSELRRTNSE SNSRGFGPYK KRKMVTEEEE HEIHLHL
101: SKVAREATGG DGSSVEPIVI PPPRPKRKPA HPYPRKFGNE ADQTSRSVSP SERDTQSPTS VLSTVGSEAL CSLDSSSPNR SLSPVSSASP PAALTTTANA
201: PEELETLKLE LFPSERLLNR ESSIKEPTKQ SLKLFGKTVL VSDSGMSSSL TTSTYCKSPI QPLPRKLSSS KTLPIIRNSQ EELLSCWIQV PLKQEDVENR
301: CLDSGKAVQN EGSSTGSNTG SVDDTGHTEK TTEPETMLCQ WEFKPSERSA FSELRRTNSE SNSRGFGPYK KRKMVTEEEE HEIHLHL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.