Factsheet for AT4G01280.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07188	Canola	nucleus	75.25	76.51
CDY48515	Canola	nucleus	75.91	75.16
Bra037365.1-P	Field mustard	nucleus	74.92	66.96
AT1G01520.3	Thale cress	plastid	52.81	55.75
GSMUA_Achr7P04620_001	Banana	nucleus	48.51	55.06
VIT_15s0046g02260.t01	Wine grape	nucleus	58.09	53.66
KRH40382	Soybean	nucleus	48.18	50.87
KRH00849	Soybean	nucleus	51.16	50.32
AT5G52660.2	Thale cress	nucleus	50.16	45.92
Solyc01g095030.2.1	Tomato	nucleus	49.17	45.02
PGSC0003DMT400000546	Potato	nucleus	46.86	44.65
AT3G09600.7	Thale cress	nucleus	43.56	44.3
AT5G02840.1	Thale cress	nucleus	40.59	41.98
AT5G37260.1	Thale cress	nucleus	23.43	24.74
AT3G10113.1	Thale cress	nucleus	21.78	19.64
AT5G17300.1	Thale cress	nucleus	23.76	18.6
AT1G18330.2	Thale cress	nucleus	22.77	18.55
AT2G46830.1	Thale cress	nucleus	24.75	12.34
AT1G01060.7	Thale cress	nucleus	24.09	11.32

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	MapMan:27.1.6.2	EntrezGene:827903	UniProt:A0A178UV36	EMBL:AB493668
ProteinID:AEE82003.1	ProteinID:AEE82004.1	EMBL:AJ937212	ArrayExpress:AT4G01280	EnsemblPlantsGene:AT4G01280	RefSeq:AT4G01280
TAIR:AT4G01280	RefSeq:AT4G01280-TAIR-G	EnsemblPlants:AT4G01280.2	TAIR:AT4G01280.2	EMBL:AY519513	EMBL:BT024711
UniProt:C0SVG5	ProteinID:CAB80937.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009628	GO:GO:0009651	GO:GO:0009719	GO:GO:0009723	GO:GO:0009733	GO:GO:0009737
GO:GO:0009739	GO:GO:0009751	GO:GO:0009753	GO:GO:0009987	GO:GO:0046686	InterPro:Homeobox-like_sf
InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	RefSeq:NP_001031568.1	RefSeq:NP_192037.2	ProteinID:OAO97483.1
PFAM:PF00249	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025281	PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF83	InterPro:SANT/Myb
SMART:SM00717	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI00005DC04F	SEG:seg	:

Description

RVE5Protein REVEILLE 5 [Source:UniProtKB/Swiss-Prot;Acc:C0SVG5]

Coordinates

chr4:+:535241..537554

Molecular Weight (calculated)

33892.1 Da

IEP (calculated)

9.732

GRAVY (calculated)

-0.641

Length

303 amino acids

Sequence
(BLAST)

001: MVSVNPRPKG FPVFDSSNMS LPSSDGFGSI PATGRTSTVS FSEDPTTKIR KPYTIKKSRE NWTDQEHDKF LEALHLFDRD WKKIEAFVGS KTVVQIRSHA
101: QKYFLKVQKS GANEHLPPPR PKRKASHPYP IKAPKNVAYT SLPSSSTLPL LEPGYLYSSD SKSLMGNQAV CASTSSSWNH ESTNLPKPVI EVEEPGVSAT
201: APLPNNRCRQ EDTERVRAVT KPNNEESCEK PHRVMPNFAE VYSFIGSVFD PNTSGHLQRL KQMDPINMET VLLLMQNLSV NLTSPEFAEQ RRLISSYSAK
301: ALK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.