Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38566 | Canola | nucleus | 85.02 | 76.01 |
| CDY26997 | Canola | nucleus | 84.32 | 75.39 |
| Bra039503.1-P | Field mustard | nucleus | 83.97 | 72.37 |
| KRH20042 | Soybean | nucleus | 38.33 | 38.33 |
| AT5G17300.1 | Thale cress | nucleus | 45.99 | 34.11 |
| KRG98008 | Soybean | nucleus | 42.86 | 34.07 |
| AT3G10113.1 | Thale cress | nucleus | 34.49 | 29.46 |
| KRH72927 | Soybean | nucleus | 43.21 | 28.44 |
| KRH17280 | Soybean | nucleus | 43.21 | 28.44 |
| AT1G18330.2 | Thale cress | nucleus | 34.84 | 26.88 |
| VIT_04s0079g00410.t01 | Wine grape | nucleus | 44.6 | 26.72 |
| Solyc02g036370.2.1 | Tomato | nucleus | 42.51 | 26.29 |
| PGSC0003DMT400055263 | Potato | nucleus | 43.21 | 26.05 |
| AT4G01280.2 | Thale cress | nucleus | 24.74 | 23.43 |
| AT1G01520.3 | Thale cress | plastid | 22.65 | 22.65 |
| AT5G02840.1 | Thale cress | nucleus | 23.0 | 22.53 |
| AT3G09600.7 | Thale cress | nucleus | 23.34 | 22.48 |
| AT5G52660.2 | Thale cress | nucleus | 24.04 | 20.85 |
| AT1G01060.7 | Thale cress | nucleus | 36.93 | 16.43 |
| AT2G46830.1 | Thale cress | nucleus | 33.8 | 15.95 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.2 | EntrezGene:833700 | EMBL:AB017069 | ProteinID:AED94158.1 | ArrayExpress:AT5G37260 |
| EnsemblPlantsGene:AT5G37260 | RefSeq:AT5G37260 | TAIR:AT5G37260 | RefSeq:AT5G37260-TAIR-G | EnsemblPlants:AT5G37260.1 | TAIR:AT5G37260.1 |
| EMBL:AY519515 | EMBL:BT010947 | EMBL:BT011641 | UniProt:F4K5X6 | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0006950 | GO:GO:0007275 | GO:GO:0007623 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009719 | GO:GO:0009723 | GO:GO:0009733 | GO:GO:0009737 |
| GO:GO:0009739 | GO:GO:0009751 | GO:GO:0009753 | GO:GO:0009791 | GO:GO:0009845 | GO:GO:0009908 |
| GO:GO:0009909 | GO:GO:0009987 | GO:GO:0048511 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom |
| InterPro:Myb_dom_plants | RefSeq:NP_198542.1 | PFAM:PF00249 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51294 | PANTHER:PTHR12802 | PANTHER:PTHR12802:SF60 |
| Symbol:RVE2 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0000162767 |
| SEG:seg | : | : | : | : | : |
Description
RVE2Protein REVEILLE 2 [Source:UniProtKB/Swiss-Prot;Acc:F4K5X6]
Coordinates
chr5:-:14751344..14753088
Molecular Weight (calculated)
32438.1 Da
IEP (calculated)
7.540
GRAVY (calculated)
-0.748
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMQERCESL CSDELISSSD AFYLKTRKPY TITKQREKWT EAEHEKFVEA LKLYGRAWRR IEEHVGTKTA VQIRSHAQKF FTKVARDFGV SSESIEIPPP
101: RPKRKPMHPY PRKLVIPDAK EMVYAELTGS KLIQDEDNRS PTSVLSAHGS DGLGSIGSNS PNSSSAELSS HTEESLSLEA ETKQSLKLFG KTFVVGDYNS
201: SMSCDDSEDG KKKLYSETQS LQCSSSTSEN AETEVVVSEF KRSERSAFSQ LKSSVTEMNN MRGFMPYKKR VKVEENIDNV KLSYPLW
101: RPKRKPMHPY PRKLVIPDAK EMVYAELTGS KLIQDEDNRS PTSVLSAHGS DGLGSIGSNS PNSSSAELSS HTEESLSLEA ETKQSLKLFG KTFVVGDYNS
201: SMSCDDSEDG KKKLYSETQS LQCSSSTSEN AETEVVVSEF KRSERSAFSQ LKSSVTEMNN MRGFMPYKKR VKVEENIDNV KLSYPLW
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.