CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG98008	Soybean	nucleus	92.68	73.68
KRH72927	Soybean	nucleus	70.03	46.1
KRH17280	Soybean	nucleus	70.03	46.1
AT5G37260.1	Thale cress	nucleus	38.33	38.33
VIT_04s0079g00410.t01	Wine grape	nucleus	58.19	34.86
CDY38566	Canola	nucleus	37.63	33.64
CDY26997	Canola	nucleus	36.93	33.02
Bra039503.1-P	Field mustard	nucleus	36.93	31.83
PGSC0003DMT400055263	Potato	nucleus	47.74	28.78
Solyc02g036370.2.1	Tomato	nucleus	45.99	28.45
KRH40382	Soybean	nucleus	25.44	25.44
KRH00849	Soybean	nucleus	26.48	24.68
KRH09476	Soybean	nucleus	40.77	24.53
KRH08856	Soybean	nucleus	25.44	24.25
KRH38938	Soybean	nucleus	38.68	23.82
KRH35235	Soybean	nucleus	24.74	22.76
KRH06589	Soybean	nucleus	26.13	22.59
KRH48063	Soybean	nucleus	25.78	22.36
KRG91589	Soybean	nucleus	25.44	22.19
KRH32383	Soybean	plastid	22.65	22.11
KRH38371	Soybean	nucleus	26.13	21.25
KRH67632	Soybean	nucleus	21.95	21.07
KRH19794	Soybean	nucleus	21.95	20.93
KRG95914	Soybean	nucleus	20.91	20.76
KRH68974	Soybean	nucleus	31.71	12.17
KRH06339	Soybean	nucleus	31.01	11.87
KRH47757	Soybean	nucleus	30.31	11.6
KRG97259	Soybean	nucleus, plastid	32.06	11.23

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	EntrezGene:778058	EMBL:ACUP02008232	EMBL:DQ822922	EnsemblPlantsGene:GLYMA_13G152300
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930	EnsemblPlants:KRH20042
ProteinID:KRH20042	ProteinID:KRH20042.1	EMBL:KT031199	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249
PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF60	UniProt:Q0PJI0	InterPro:SANT/Myb	SMART:SM00717
SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI0000DBD8BE	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr13:-:26688264..26691680

Molecular Weight (calculated)

31822.2 Da

IEP (calculated)

7.641

GRAVY (calculated)

-0.859

Length

287 amino acids

Sequence
(BLAST)

001: MAIQDQNGFF RSQGGPPEGG GVSLSSGHSV THIQLNDQFS CGNDYALKVR KPYTITKQRE RWTDEEHKKF LEALKLYGRA WRRIEEHVGT KTAVQIRSHA
101: QKFFSKVLHD PTGNNTNTVE SIEIPPPRPK RKPMHPYPRK LVETPNKEIS IPEQPMKSNS LKSSDFDQEN QSPKSVLSGV GSDSLGSSDS DTPNGSLSPM
201: SSISGFHTSS FTRAKPKTTT SEEEAGMDTD STHDEKPLMK FKLPPNGCVS IKEDNTAEES SGRTFKLFGM TLFVTDTCKP SPTIEEC

Best Arabidopsis Sequence Match ( AT5G17300.1 )
(BLAST)

001: MASSPLTANV QGTNASLRNR DEETADKQIQ FNDQSFGGND YAPKVRKPYT ITKERERWTD EEHKKFVEAL KLYGRAWRRI EEHVGSKTAV QIRSHAQKFF
101: SKVAREATGG DGSSVEPIVI PPPRPKRKPA HPYPRKFGNE ADQTSRSVSP SERDTQSPTS VLSTVGSEAL CSLDSSSPNR SLSPVSSASP PAALTTTANA
201: PEELETLKLE LFPSERLLNR ESSIKEPTKQ SLKLFGKTVL VSDSGMSSSL TTSTYCKSPI QPLPRKLSSS KTLPIIRNSQ EELLSCWIQV PLKQEDVENR
301: CLDSGKAVQN EGSSTGSNTG SVDDTGHTEK TTEPETMLCQ WEFKPSERSA FSELRRTNSE SNSRGFGPYK KRKMVTEEEE HEIHLHL

Arabidopsis Description

RVE1Protein REVEILLE 1 [Source:UniProtKB/Swiss-Prot;Acc:F4KGY6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.