CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32383	Soybean	plastid	86.71	88.78
KRG95914	Soybean	nucleus	68.11	70.93
KRH67632	Soybean	nucleus	68.44	68.9
VIT_08s0040g03220.t01	Wine grape	nucleus	63.12	67.14
Bra034074.1-P	Field mustard	nucleus	58.14	66.54
PGSC0003DMT400028711	Potato	nucleus	62.79	66.08
Solyc10g084370.1.1	Tomato	nucleus	64.45	65.54
AT3G09600.7	Thale cress	nucleus	61.79	62.42
CDY41299	Canola	nucleus	58.14	61.62
CDX70341	Canola	nucleus	57.14	60.35
CDX80840	Canola	nucleus	53.82	60.0
CDY11228	Canola	nucleus	54.15	59.06
AT5G02840.1	Thale cress	nucleus	57.48	59.04
Bra029778.1-P	Field mustard	nucleus	58.47	57.89
CDY41598	Canola	nucleus	57.81	57.81
CDY44719	Canola	nucleus	58.14	57.57
Bra005751.1-P	Field mustard	nucleus	53.49	56.89
Bra009562.1-P	Field mustard	nucleus	57.48	55.45
KRH35235	Soybean	nucleus	50.83	49.04
KRH08856	Soybean	nucleus	47.84	47.84
KRG91589	Soybean	nucleus	49.83	45.59
KRH40382	Soybean	nucleus	42.86	44.95
KRH00849	Soybean	nucleus	45.18	44.16
KRH06589	Soybean	nucleus	48.51	43.98
KRH48063	Soybean	nucleus	46.84	42.6
KRH38371	Soybean	nucleus	48.84	41.64
CDY10419	Canola	nucleus	55.48	31.27
KRH20042	Soybean	nucleus	20.93	21.95
KRG98008	Soybean	nucleus	21.26	17.73
KRH17280	Soybean	nucleus	23.59	16.28
KRH72927	Soybean	nucleus	22.92	15.83
KRH38938	Soybean	nucleus	23.92	15.45
KRH09476	Soybean	nucleus	23.92	15.09
KRH06339	Soybean	nucleus	24.25	9.73
KRH68974	Soybean	nucleus	23.26	9.36
KRH47757	Soybean	nucleus	23.26	9.33
KRG97259	Soybean	nucleus, plastid	23.59	8.67

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100797466	MapMan:15.5.2.2	MapMan:27.1.6.2	UniProt:A0A0R0GUJ1	EMBL:ACUP02008206
EnsemblPlantsGene:GLYMA_13G136300	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930
EnsemblPlants:KRH19794	ProteinID:KRH19794	ProteinID:KRH19794.1	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249
PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF81	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689
TIGRFAMs:TIGR01557	UniParc:UPI0006ED53CF	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:24891067..24896379

Molecular Weight (calculated)

33166.4 Da

IEP (calculated)

8.909

GRAVY (calculated)

-0.435

Length

301 amino acids

Sequence
(BLAST)

001: MNSSTNTSNS QSMAAAASDG SGKKVRKPYT ITKSRESWTE EEHDKFLEAL QLFDRDWKKI EDFVGSKTVI QIRSHAQKYF LKVQKNGTVA HVPPPRPKRK
101: AAHPYPQKAS KNVLVPLPAS VGYASSRNTL APGFASWDET SLLMNAGADK PMTCQDELNN VHHGNEADIG SKGITQITNS SLSGVGNSTR TLLTSEIPKQ
201: GKQAPVLHGL PDFAEVYGFI GSVFDPETND HVQKLKEMDP INFETVLLLM RNLTVNLSSP DFEPILLVSV DRPKQGQIQR GGLLPTLATH VLTFFLYFFG
301: D

Best Arabidopsis Sequence Match ( AT3G09600.4 )
(BLAST)

001: MSSSPSRNPT NAEAPPPPPT STDAVAEGSS KKVRKPYTIT KSRESWTEEE HDKFLEALQL FDRDWKKIED FVGSKTVIQI RSHAQKYFLK VQKNGTLAHV
101: PPPRPKRKAA HPYPQKASKN AQMPLQVSTS FTTTRNGDMP GYASWDDASM LLNRVISPQH ELATLRGAEA DIGSKGLLNV SSPSTSGMGS SSRTVSGSEI
201: VRKAKQPPVL HGVPDFAEVY NFIGSVFDPE TRGHVEKLKE MDPINFETVL LLMRNLTVNL SNPDLESTVS VKFAIKDL

Arabidopsis Description

RVE8Protein REVEILLE 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.