Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029778.1-P | Field mustard | nucleus | 94.35 | 93.42 |
| CDY44719 | Canola | nucleus | 94.02 | 93.09 |
| AT3G09600.7 | Thale cress | nucleus | 82.72 | 83.56 |
| CDY41299 | Canola | nucleus | 76.41 | 80.99 |
| CDY11228 | Canola | nucleus | 60.8 | 66.3 |
| CDX70341 | Canola | nucleus | 62.46 | 65.96 |
| CDX80840 | Canola | nucleus | 58.8 | 65.56 |
| KRH32383 | Soybean | plastid | 61.46 | 62.93 |
| VIT_08s0040g03220.t01 | Wine grape | nucleus | 57.81 | 61.48 |
| PGSC0003DMT400028711 | Potato | nucleus | 58.14 | 61.19 |
| Solyc10g084370.1.1 | Tomato | nucleus | 59.8 | 60.81 |
| KRH67632 | Soybean | nucleus | 59.14 | 59.53 |
| KRG95914 | Soybean | nucleus | 56.81 | 59.17 |
| KRH19794 | Soybean | nucleus | 57.81 | 57.81 |
| CDX90039 | Canola | plastid | 43.19 | 48.15 |
| CDY52837 | Canola | nucleus | 47.84 | 47.06 |
| CDY15171 | Canola | nucleus | 42.19 | 47.04 |
| CDY56155 | Canola | nucleus | 48.17 | 44.89 |
| CDY27841 | Canola | nucleus | 41.86 | 44.06 |
| CDY51831 | Canola | vacuole | 48.17 | 41.67 |
| CDY07188 | Canola | nucleus | 41.2 | 41.61 |
| CDY48515 | Canola | nucleus | 42.19 | 41.5 |
| CDY10419 | Canola | nucleus | 62.46 | 35.21 |
| CDY16939 | Canola | nucleus | 23.59 | 23.67 |
| CDY38566 | Canola | nucleus | 21.93 | 20.56 |
| CDY26997 | Canola | nucleus | 21.26 | 19.94 |
| CDX69388 | Canola | nucleus | 23.92 | 19.25 |
| CDY02714 | Canola | nucleus | 23.26 | 18.97 |
| CDX70747 | Canola | nucleus | 22.59 | 18.84 |
| CDX85462 | Canola | nucleus | 23.26 | 18.77 |
| CDX78737 | Canola | nucleus | 21.93 | 18.08 |
| CDY26169 | Canola | nucleus | 18.6 | 17.83 |
| CDY19206 | Canola | nucleus | 19.93 | 16.57 |
| CDX80051 | Canola | nucleus | 23.26 | 12.68 |
| CDX90004 | Canola | nucleus | 24.92 | 12.34 |
| CDY15205 | Canola | nucleus | 24.92 | 12.02 |
| CDX80750 | Canola | nucleus | 22.26 | 11.82 |
| CDY61862 | Canola | nucleus | 22.59 | 11.6 |
| CDY41563 | Canola | nucleus | 23.59 | 9.44 |
| CDY64825 | Canola | cytosol, nucleus, plastid | 1.33 | 2.55 |
| CDX80052 | Canola | cytosol | 0.66 | 0.93 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.2 | MapMan:27.1.6.2 | GO:A0A078HXZ3 | UniProt:A0A078HXZ3 | EnsemblPlants:CDY41598 |
| ProteinID:CDY41598 | ProteinID:CDY41598.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00073245001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 |
| PANTHER:PTHR12802 | PANTHER:PTHR12802:SF81 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 |
| UniParc:UPI0004EE92C3 | SEG:seg | : | : | : | : |
Description
BnaC05g43350DBnaC05g43350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HXZ3]
Coordinates
chrLK032501:-:157925..160601
Molecular Weight (calculated)
33282.2 Da
IEP (calculated)
7.869
GRAVY (calculated)
-0.561
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSSPTRNPT SAEVTPPLSS TSTAAEGSSK KVRKPYTITK SRESWTEEEH DKFLEALQLF DRDWKKIEDF VGSKTVIQIR SHAQKYFLKV QKNGTLAHVP
101: PPRPKRKSAH PYPQKASKNA QMPLQVSTSF TSRNSDMAGG YTSWDDVSMM LNRVISPRQE LVTLPGAEGM LFNDIRSKGL LDVISPSTSG MGSSSRPVSG
201: SEFIVQQPPV LQAVPDFAEV YNFIGSVFDP EKRGHVEKLK EMDPVNFETV LLLMRNLTVN LSNPDLESSR NVLSSDEVNT EIPSVTTGSF VPNSTSDKSD
301: S
101: PPRPKRKSAH PYPQKASKNA QMPLQVSTSF TSRNSDMAGG YTSWDDVSMM LNRVISPRQE LVTLPGAEGM LFNDIRSKGL LDVISPSTSG MGSSSRPVSG
201: SEFIVQQPPV LQAVPDFAEV YNFIGSVFDP EKRGHVEKLK EMDPVNFETV LLLMRNLTVN LSNPDLESSR NVLSSDEVNT EIPSVTTGSF VPNSTSDKSD
301: S
001: MSSSPSRNPT NAEAPPPPPT STDAVAEGSS KKVRKPYTIT KSRESWTEEE HDKFLEALQL FDRDWKKIED FVGSKTVIQI RSHAQKYFLK VQKNGTLAHV
101: PPPRPKRKAA HPYPQKASKN AQMPLQVSTS FTTTRNGDMP GYASWDDASM LLNRVISPQH ELATLRGAEA DIGSKGLLNV SSPSTSGMGS SSRTVSGSEI
201: VRKAKQPPVL HGVPDFAEVY NFIGSVFDPE TRGHVEKLKE MDPINFETVL LLMRNLTVNL SNPDLESTRK VLLSYDNVTT ELPSVVSLVK NSTSDKSA
101: PPPRPKRKAA HPYPQKASKN AQMPLQVSTS FTTTRNGDMP GYASWDDASM LLNRVISPQH ELATLRGAEA DIGSKGLLNV SSPSTSGMGS SSRTVSGSEI
201: VRKAKQPPVL HGVPDFAEVY NFIGSVFDPE TRGHVEKLKE MDPINFETVL LLMRNLTVNL SNPDLESTRK VLLSYDNVTT ELPSVVSLVK NSTSDKSA
Arabidopsis Description
RVE8Protein REVEILLE 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.