Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90039 | Canola | plastid | 95.56 | 95.56 |
| AT1G01520.3 | Thale cress | plastid | 69.63 | 65.51 |
| GSMUA_Achr7P04620_001 | Banana | nucleus | 54.81 | 55.43 |
| CDY07188 | Canola | nucleus | 57.04 | 51.68 |
| KRH40382 | Soybean | nucleus | 53.33 | 50.17 |
| CDY48515 | Canola | nucleus | 56.67 | 50.0 |
| VIT_15s0046g02260.t01 | Wine grape | nucleus | 60.0 | 49.39 |
| KRH00849 | Soybean | nucleus | 55.56 | 48.7 |
| CDY52837 | Canola | nucleus | 54.81 | 48.37 |
| CDY41299 | Canola | nucleus | 49.26 | 46.83 |
| CDX80840 | Canola | nucleus | 46.3 | 46.3 |
| CDY27841 | Canola | nucleus | 48.89 | 46.15 |
| CDY56155 | Canola | nucleus | 55.19 | 46.13 |
| PGSC0003DMT400000546 | Potato | nucleus | 53.7 | 45.6 |
| CDY11228 | Canola | nucleus | 45.56 | 44.57 |
| CDX70341 | Canola | nucleus | 46.3 | 43.86 |
| Solyc01g095030.2.1 | Tomato | nucleus | 53.33 | 43.5 |
| CDY51831 | Canola | vacuole | 55.56 | 43.1 |
| CDY44719 | Canola | nucleus | 47.78 | 42.43 |
| CDY41598 | Canola | nucleus | 47.04 | 42.19 |
| CDY10419 | Canola | nucleus | 45.56 | 23.03 |
| CDY16939 | Canola | nucleus | 24.81 | 22.33 |
| CDY38566 | Canola | nucleus | 25.56 | 21.5 |
| CDY26997 | Canola | nucleus | 25.19 | 21.18 |
| CDX69388 | Canola | nucleus | 25.56 | 18.45 |
| CDY02714 | Canola | nucleus | 24.81 | 18.16 |
| CDY26169 | Canola | nucleus | 20.74 | 17.83 |
| CDX85462 | Canola | nucleus | 24.44 | 17.69 |
| CDX70747 | Canola | nucleus | 23.33 | 17.45 |
| CDX78737 | Canola | nucleus | 23.33 | 17.26 |
| CDY19206 | Canola | nucleus | 21.48 | 16.02 |
| CDX80051 | Canola | nucleus | 28.15 | 13.77 |
| CDX80750 | Canola | nucleus | 24.44 | 11.64 |
| CDX90004 | Canola | nucleus | 25.56 | 11.35 |
| CDY61862 | Canola | nucleus | 24.44 | 11.26 |
| CDY15205 | Canola | nucleus | 25.56 | 11.06 |
| CDY41563 | Canola | nucleus | 27.04 | 9.71 |
| CDY64825 | Canola | cytosol, nucleus, plastid | 1.48 | 2.55 |
| CDX80052 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.2 | MapMan:27.1.6.2 | GO:A0A078FPX8 | UniProt:A0A078FPX8 | EnsemblPlants:CDY15171 |
| ProteinID:CDY15171 | ProteinID:CDY15171.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00085351001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 |
| PANTHER:PTHR12802 | PANTHER:PTHR12802:SF83 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 |
| UniParc:UPI0004EE2FAB | SEG:seg | : | : | : | : |
Description
BnaC05g00500DBnaC05g00500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FPX8]
Coordinates
chrLK032052:-:287032..288586
Molecular Weight (calculated)
30869.9 Da
IEP (calculated)
9.060
GRAVY (calculated)
-0.651
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MNMNLPGFST TLPHSKTTMP VSARSHTMSF SEDPTKMIRK PYTITKSREN WTEQEHDKFI EALHLFDRDW KKIEAFVGSK TVIQIRSHAQ KYFLKVQKNG
101: TNEHLPPPRP KRKANHPYPQ KASKSVALAT SNALLEHEYL YTTDPQPLIS TPNQGLMRCN VITPIPVIKE ELGVLENCCS TSSSSSIRDQ MRTRTVTETD
201: DQRVMPNFDE VYSFIGSVFD PKTTGHAQRL KQMDPINLET VLLLMKNLSV NLSSPEFEEQ RRLISSYNGE
101: TNEHLPPPRP KRKANHPYPQ KASKSVALAT SNALLEHEYL YTTDPQPLIS TPNQGLMRCN VITPIPVIKE ELGVLENCCS TSSSSSIRDQ MRTRTVTETD
201: DQRVMPNFDE VYSFIGSVFD PKTTGHAQRL KQMDPINLET VLLLMKNLSV NLSSPEFEEQ RRLISSYNGE
001: MVTVNPSQAH CLPMKMSLPG FNTLPHTATT IPVSIRSNRT MSFFEDPTKK VRKPYTITKS RENWTEQEHD KFLEALHLFD RDWKKIKAFV GSKTVIQIRS
101: HAQKYFLKVQ KNGTKEHLPP PRPKRKANHP YPQKAPKFTL SSSNALFQHD YLYNTNSHPV ISTTRKHGLV HCDVSIPSSV IKEEFGVSEN CCSTSSSRDK
201: QRTRIVTETN DQESCGKPHR VAPNFAEVYN FIGSVFDPKT TGHVKRLKEM DPINLETVLL LMKNLSVNLT SPEFDEQRKL ISSYNAS
101: HAQKYFLKVQ KNGTKEHLPP PRPKRKANHP YPQKAPKFTL SSSNALFQHD YLYNTNSHPV ISTTRKHGLV HCDVSIPSSV IKEEFGVSEN CCSTSSSRDK
201: QRTRIVTETN DQESCGKPHR VAPNFAEVYN FIGSVFDPKT TGHVKRLKEM DPINLETVLL LMKNLSVNLT SPEFDEQRKL ISSYNAS
Arabidopsis Description
ASG4 [Source:UniProtKB/TrEMBL;Acc:A0A178W835]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.