CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH00849	Soybean	nucleus	85.37	79.55
KRH06589	Soybean	nucleus	70.38	60.84
KRH48063	Soybean	nucleus	68.29	59.21
KRH08856	Soybean	nucleus	59.23	56.48
Bra033257.1-P	Field mustard	plastid	50.87	54.07
CDX90039	Canola	plastid	50.87	54.07
KRH35235	Soybean	nucleus	58.19	53.53
CDY15171	Canola	nucleus	50.17	53.33
KRG91589	Soybean	nucleus	57.14	49.85
AT1G01520.3	Thale cress	plastid	48.78	48.78
CDY07188	Canola	nucleus	50.52	48.66
AT4G01280.2	Thale cress	nucleus	50.87	48.18
CDY48515	Canola	nucleus	50.17	47.06
KRH38371	Soybean	nucleus	57.84	47.03
KRH32383	Soybean	plastid	47.74	46.6
KRG95914	Soybean	nucleus	44.95	44.64
KRH67632	Soybean	nucleus	46.34	44.48
KRH19794	Soybean	nucleus	44.95	42.86
Bra037365.1-P	Field mustard	nucleus	50.17	42.48
KRH20042	Soybean	nucleus	25.44	25.44
KRG98008	Soybean	nucleus	26.13	20.78
KRH17280	Soybean	nucleus	27.18	17.89
KRH09476	Soybean	nucleus	29.27	17.61
KRH38938	Soybean	nucleus	28.57	17.6
KRH72927	Soybean	nucleus	26.13	17.2
KRH68974	Soybean	nucleus	26.83	10.29
KRH06339	Soybean	nucleus	25.78	9.87
KRH47757	Soybean	nucleus	25.09	9.6
KRG97259	Soybean	nucleus, plastid	26.83	9.4

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	MapMan:27.1.6.2	EMBL:ACUP02006036	EnsemblPlantsGene:GLYMA_09G255300	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:K7LG15	EnsemblPlants:KRH40382
ProteinID:KRH40382	ProteinID:KRH40382.1	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294
PANTHER:PTHR12802	PANTHER:PTHR12802:SF83	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	TIGRFAMs:TIGR01557
UniParc:UPI0002965C91	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:47469957..47473850

Molecular Weight (calculated)

32648.5 Da

IEP (calculated)

10.283

GRAVY (calculated)

-0.791

Length

287 amino acids

Sequence
(BLAST)

001: MVSLNPNPPQ TFHFFDPFHM EDQSKKVRKP YTITKSRENW TDQEHDKFLE ALHLFERDWK KIEAFVGSKT IRSHAQKYFM KIQKNGTSEH VPPPRPKRKA
101: AHPYPQKASK NSPTISQVAR PFQSSSALSE SSNIYRPDSS SVLRTPVSSV PLPSWGYNVA PPIGLPSYCY SSSNESTPRG WPSSKESDQG KSIIVMPDFA
201: QVYRFIGSVF DPNATNHLQT LKQMNPINVK TVLLSMRNLS TNLRSPEFEN ERRLLSLYNA NLEKGKSGSH HRNQPLSDRS ESAVLYA

Best Arabidopsis Sequence Match ( AT1G01520.1 )
(BLAST)

001: MVTVNPSQAH CLPMKMSLPG FNTLPHTATT IPVSIRSNRT MSFFEDPTKK VRKPYTITKS RENWTEQEHD KFLEALHLFD RDWKKIKAFV GSKTVIQIRS
101: HAQKYFLKVQ KNGTKEHLPP PRPKRKANHP YPQKAPKFTL SSSNALFQHD YLYNTNSHPV ISTTRKHGLV HCDVSIPSSV IKEEFGVSEN CCSTSSSRDK
201: QRTRIVTETN DQESCGKPHR VAPNFAEVYN FIGSVFDPKT TGHVKRLKEM DPINLETVLL LMKNLSVNLT SPEFDEQRKL ISSYNAS

Arabidopsis Description

ASG4 [Source:UniProtKB/TrEMBL;Acc:A0A178W835]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.