CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48063	Soybean	nucleus	90.66	90.94
KRH00849	Soybean	nucleus	66.27	71.43
KRH40382	Soybean	nucleus	60.84	70.38
VIT_15s0046g02260.t01	Wine grape	nucleus	68.37	69.21
KRH08856	Soybean	nucleus	57.23	63.12
GSMUA_Achr7P04620_001	Banana	nucleus	49.7	61.8
KRH35235	Soybean	nucleus	57.23	60.9
KRG91589	Soybean	nucleus	57.23	57.75
PGSC0003DMT400000546	Potato	nucleus	52.11	54.4
Solyc01g095030.2.1	Tomato	nucleus	53.92	54.08
KRH38371	Soybean	nucleus	56.63	53.26
KRH32383	Soybean	plastid	45.78	51.7
KRG95914	Soybean	nucleus	43.07	49.48
KRH19794	Soybean	nucleus	43.98	48.51
KRH67632	Soybean	nucleus	42.77	47.49
KRH20042	Soybean	nucleus	22.59	26.13
KRG98008	Soybean	nucleus	22.89	21.05
KRH17280	Soybean	nucleus	23.8	18.12
KRH09476	Soybean	nucleus	25.9	18.03
KRH38938	Soybean	nucleus	24.4	17.38
KRH72927	Soybean	nucleus	22.59	17.2
KRH68974	Soybean	nucleus	26.2	11.63
KRH06339	Soybean	nucleus	24.1	10.67
KRG97259	Soybean	nucleus, plastid	25.9	10.5
KRH47757	Soybean	nucleus	23.49	10.4

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	MapMan:27.1.6.2	EntrezGene:778090	EMBL:ACUP02009851	EnsemblPlantsGene:GLYMA_16G032600
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	UniProt:I1MKS3	InterPro:IPR017930
EnsemblPlants:KRH06589	ProteinID:KRH06589	ProteinID:KRH06589.1	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249
PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF83	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689
TIGRFAMs:TIGR01557	UniParc:UPI000233E626	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr16:+:3082737..3089050

Molecular Weight (calculated)

36789.5 Da

IEP (calculated)

9.382

GRAVY (calculated)

-0.607

Length

332 amino acids

Sequence
(BLAST)

001: MVSVNPNPAQ GFYFFDPSNM TLPGVNNLPP PPPPAPAAPS AVEDPNKKIR KPYTITKSRE SWTEQEHDKF LEALQLFDRD WKKIEAFVGS KTVIQIRSHA
101: QKYFLKVQKN GTSEHVPPPR PKRKAARPYP QKAPKTPTVS QVMGPLQSSS AFIEPAYIYS PDSSSVLGTP VTNMPLSSWN YNTTPQPGNV PQVTRDDMGL
201: TGAGQAAPLN CCYSSSNEST PPTWPRSKRI NQGDQGKPIK VMPDFAQVYS FIGSVFDPNS TNHLQKLQQM DPINVETVLL LMTNLSVNLM SPEFEDHKRL
301: LSSYDTDSDK SKFVNICSKS FTNKSESAVL SA

Best Arabidopsis Sequence Match ( AT4G01280.2 )
(BLAST)

001: MVSVNPRPKG FPVFDSSNMS LPSSDGFGSI PATGRTSTVS FSEDPTTKIR KPYTIKKSRE NWTDQEHDKF LEALHLFDRD WKKIEAFVGS KTVVQIRSHA
101: QKYFLKVQKS GANEHLPPPR PKRKASHPYP IKAPKNVAYT SLPSSSTLPL LEPGYLYSSD SKSLMGNQAV CASTSSSWNH ESTNLPKPVI EVEEPGVSAT
201: APLPNNRCRQ EDTERVRAVT KPNNEESCEK PHRVMPNFAE VYSFIGSVFD PNTSGHLQRL KQMDPINMET VLLLMQNLSV NLTSPEFAEQ RRLISSYSAK
301: ALK

Arabidopsis Description

RVE5Protein REVEILLE 5 [Source:UniProtKB/Swiss-Prot;Acc:C0SVG5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.