CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20042	Soybean	nucleus	73.68	92.68
KRH17280	Soybean	nucleus	67.04	55.5
KRH72927	Soybean	nucleus	65.93	54.59
AT5G37260.1	Thale cress	nucleus	34.07	42.86
VIT_04s0079g00410.t01	Wine grape	nucleus	53.19	40.08
CDY38566	Canola	nucleus	34.07	38.32
CDY26997	Canola	nucleus	33.52	37.69
Bra039503.1-P	Field mustard	nucleus	33.52	36.34
PGSC0003DMT400055263	Potato	nucleus	44.04	33.4
Solyc02g036370.2.1	Tomato	nucleus	42.66	33.19
KRH09476	Soybean	nucleus	36.29	27.46
KRH38938	Soybean	nucleus	34.9	27.04
KRH40382	Soybean	nucleus	20.78	26.13
KRH00849	Soybean	nucleus	21.33	25.0
KRH08856	Soybean	nucleus	20.78	24.92
KRH35235	Soybean	nucleus	20.5	23.72
KRH32383	Soybean	plastid	19.11	23.47
KRH48063	Soybean	nucleus	21.33	23.26
KRH67632	Soybean	nucleus	19.11	23.08
KRH06589	Soybean	nucleus	21.05	22.89
KRG95914	Soybean	nucleus	18.28	22.84
KRG91589	Soybean	nucleus	20.5	22.49
KRH38371	Soybean	nucleus	21.05	21.53
KRH19794	Soybean	nucleus	17.73	21.26
KRH68974	Soybean	nucleus	29.64	14.3
KRH06339	Soybean	nucleus	29.64	14.27
KRH47757	Soybean	nucleus	29.09	14.0
KRG97259	Soybean	nucleus, plastid	30.19	13.31

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	EntrezGene:780539	EMBL:ACUP02010833	EnsemblPlantsGene:GLYMA_18G044200	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	UniProt:I1MZI3	InterPro:IPR017930	EnsemblPlants:KRG98008
ProteinID:KRG98008	ProteinID:KRG98008.1	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294
PANTHER:PTHR12802	PANTHER:PTHR12802:SF60	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	TIGRFAMs:TIGR01557
UniParc:UPI000233F13B	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:-:3813589..3817289

Molecular Weight (calculated)

39793.1 Da

IEP (calculated)

8.561

GRAVY (calculated)

-0.639

Length

361 amino acids

Sequence
(BLAST)

001: MAIQDQNGFN RSQGGPPIGG GVSLSSGVHS VTHIQLSDQF SCGNDYALKV RKPYTITKQR ERWTDEEHKK FLEALKLYGR AWRRIEEHVG TKTAVQIRSH
101: AQKFFSKLLR DPTGNNTNTV ESIEIPPPRP KRKPVHPYPR KLVETPNKEI LIPEQLMKSN SLKSSDFDQE NQSPKSVLSG VGSDSLGSSD SDTPYGSLSP
201: MSSISGIHTS SFTRAEHKTT SDEAGMDTDS AHDEKPLMKF KLPPNECVSI KDDTAEESSG RTFKLFGMTL FVTDTCKPSP TIEACKPIPL NIRVRCLSSS
301: MGDDGKLELR GHSTASETSA ISKLKVRVGP EACGKGFVPY KRCISVVTAD NREEQCIHLS L

Best Arabidopsis Sequence Match ( AT5G17300.1 )
(BLAST)

001: MASSPLTANV QGTNASLRNR DEETADKQIQ FNDQSFGGND YAPKVRKPYT ITKERERWTD EEHKKFVEAL KLYGRAWRRI EEHVGSKTAV QIRSHAQKFF
101: SKVAREATGG DGSSVEPIVI PPPRPKRKPA HPYPRKFGNE ADQTSRSVSP SERDTQSPTS VLSTVGSEAL CSLDSSSPNR SLSPVSSASP PAALTTTANA
201: PEELETLKLE LFPSERLLNR ESSIKEPTKQ SLKLFGKTVL VSDSGMSSSL TTSTYCKSPI QPLPRKLSSS KTLPIIRNSQ EELLSCWIQV PLKQEDVENR
301: CLDSGKAVQN EGSSTGSNTG SVDDTGHTEK TTEPETMLCQ WEFKPSERSA FSELRRTNSE SNSRGFGPYK KRKMVTEEEE HEIHLHL

Arabidopsis Description

RVE1Protein REVEILLE 1 [Source:UniProtKB/Swiss-Prot;Acc:F4KGY6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.