Factsheet for Bra029778.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44719	Canola	nucleus	99.67	99.67
CDY41598	Canola	nucleus	93.42	94.35
AT3G09600.7	Thale cress	nucleus	84.21	85.91
Bra034074.1-P	Field mustard	nucleus	70.72	81.75
KRH32383	Soybean	plastid	61.18	63.27
Bra005751.1-P	Field mustard	nucleus	58.88	63.25
VIT_08s0040g03220.t01	Wine grape	nucleus	58.22	62.54
Bra009562.1-P	Field mustard	nucleus	64.14	62.5
PGSC0003DMT400028711	Potato	nucleus	58.22	61.89
Solyc10g084370.1.1	Tomato	nucleus	59.54	61.15
KRH67632	Soybean	nucleus	59.21	60.2
KRG95914	Soybean	nucleus	56.91	59.86
KRH19794	Soybean	nucleus	57.89	58.47
Bra033257.1-P	Field mustard	plastid	43.42	48.89
Bra003117.1-P	Field mustard	nucleus	48.36	48.04
Bra029111.1-P	Field mustard	nucleus	48.68	46.25
Bra037365.1-P	Field mustard	nucleus	42.11	37.76
Bra024430.1-P	Field mustard	mitochondrion, nucleus	14.14	20.09
Bra039503.1-P	Field mustard	nucleus	21.38	19.52
Bra008563.1-P	Field mustard	nucleus	22.7	19.44
Bra006394.1-P	Field mustard	nucleus	22.37	18.68
Bra023610.1-P	Field mustard	nucleus	22.7	18.6
Bra025914.1-P	Field mustard	nucleus	18.42	16.77
Bra004503.1-P	Field mustard	nucleus	23.03	12.68
Bra033291.1-P	Field mustard	nucleus	24.67	12.36
Bra030496.1-P	Field mustard	nucleus	22.37	11.6
Bra004502.1-P	Field mustard	cytosol	0.66	0.93

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	MapMan:27.1.6.2	EnsemblPlantsGene:Bra029778	EnsemblPlants:Bra029778.1	EnsemblPlants:Bra029778.1-P
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M4ELV8
InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF81
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI0002547B35	SEG:seg

Description

AT3G09600 (E=2e-107) | myb family transcription factor

Coordinates

chrA05:-:22305517..22307450

Molecular Weight (calculated)

33460.4 Da

IEP (calculated)

7.913

GRAVY (calculated)

-0.569

Length

304 amino acids

Sequence
(BLAST)

001: MSSSPTRNPT SAEVPPPLSS TSTDAEGSSK KVRKPYTITK SRESWTEEEH DKFLEALQLF DRDWKKIEDF VGSKTVIQIR SHAQKYFLKV QKNGTLAHVP
101: PPRPKRKAAH PYPQKASKNA QMPLQVSTSF TSRNSDMAGG YTSWDDVSMM LNRVISPRQE LATLRGAEGM LFHNIGSTGL LNVSSPSTSG MGSSSRTLSG
201: SDIIVQQAQQ PPVLQAVPDF AEVYNFIGSV FDPEKRGHVE KLKEMDPVNF ETVLLLMRNL TVNLSNPDLE SARNVLSSDE VNTEIPSVTT GSFVPNSTSD
301: KSDS

Best Arabidopsis Sequence Match ( AT3G09600.7 )
(BLAST)

001: MSSSPSRNPT NAEAPPPPPT STDAVAEGSS KKVRKPYTIT KSRESWTEEE HDKFLEALQL FDRDWKKIED FVGSKTVIQI RSHAQKYFLK VQKNGTLAHV
101: PPPRPKRKAA HPYPQKASKN AQMPLQVSTS FTTTRNGDMP GYASWDDASM LLNRVISPQH ELATLRGAEA DIGSKGLLNV SSPSTSGMGS SSRTVSGSEI
201: VRKAKQPPVL HGVPDFAEVY NFIGSVFDPE TRGHVEKLKE MDPINFETVL LLMRNLTVNL SNPDLESTRK VLLSYDNVTT ELPSVVSLVK NSTSDKSA

Arabidopsis Description

RVE8Protein REVEILLE 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.