Factsheet for Bra025914.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26169	Canola	nucleus	94.01	100.0
AT3G10113.1	Thale cress	nucleus	69.46	69.05
AT1G18330.2	Thale cress	nucleus	76.05	68.28
Bra024430.1-P	Field mustard	mitochondrion, nucleus	36.83	57.48
KRH38938	Soybean	nucleus	44.31	31.76
Bra023610.1-P	Field mustard	nucleus	34.73	31.27
KRH09476	Soybean	nucleus	44.31	31.03
Bra008563.1-P	Field mustard	nucleus	32.93	30.99
Bra006394.1-P	Field mustard	nucleus	33.23	30.49
Bra039503.1-P	Field mustard	nucleus	29.04	29.13
Zm00001d014863_P002	Maize	nucleus	32.93	25.46
KXG20957	Sorghum	nucleus	31.74	24.42
Os06t0728700-01	Rice	nucleus	32.93	24.39
TraesCS7B01G478200.1	Wheat	nucleus	32.63	22.57
Bra033257.1-P	Field mustard	plastid	17.66	21.85
TraesCS7D01G540700.3	Wheat	nucleus	31.44	21.74
HORVU7Hr1G121210.4	Barley	nucleus	31.44	21.38
Bra034074.1-P	Field mustard	nucleus	16.47	20.91
TraesCS7A01G553800.1	Wheat	nucleus	31.44	20.63
Bra003117.1-P	Field mustard	nucleus	18.86	20.59
Bra005751.1-P	Field mustard	nucleus	17.37	20.49
Bra029111.1-P	Field mustard	nucleus	19.46	20.31
Bra009562.1-P	Field mustard	nucleus	17.66	18.91
Bra037365.1-P	Field mustard	nucleus	19.16	18.88
Bra029778.1-P	Field mustard	nucleus	16.77	18.42
Bra004503.1-P	Field mustard	nucleus	27.25	16.49
Bra030496.1-P	Field mustard	nucleus	28.44	16.21
Bra033291.1-P	Field mustard	nucleus	29.04	15.98
Bra004502.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	EnsemblPlantsGene:Bra025914	EnsemblPlants:Bra025914.1	EnsemblPlants:Bra025914.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M4EAV5
InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF86
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI0000EC7D9E	SEG:seg

Description

AT1G18330 (E=3e-115) EPR1 | EPR1 (EARLY-PHYTOCHROME-RESPONSIVE1); DNA binding / transcription factor

Coordinates

chrA06:-:7020886..7022267

Molecular Weight (calculated)

36830.5 Da

IEP (calculated)

8.885

GRAVY (calculated)

-0.904

Length

334 amino acids

Sequence
(BLAST)

001: MAAPDRSEDG SSNVENGSCN SNEGTNHETS SCRIANAAKV RKPYTVSKQR EKWSEAEHER FLDAIELYGR AWRQIQEHIG TKTAVQIRSH AQKFFSKVAR
101: EADSGRDGSV KTVVIPPPRP KRKPTHPYPR KSPVPYAQSP SSNLEKGTKS PTSVLSPFDS EDQVNRCSSP NSCTSDMQSI DKKNDYATSK QSFKEDDAVT
201: GSKPISSIML FGKIVLVTGE SHKTSSSRED SGVDHKSTTG QDSRHVDTAL SLGVWDTSCT GSNVFGSVTE ISDNLEKSAE ARKRLTSLEK QEPCYRANGF
301: RPYKRCLSER EVTSSLSLVA SEEEGSRRRA RVCS

Best Arabidopsis Sequence Match ( AT1G18330.1 )
(BLAST)

001: MAAEDRSEEL SSNVENGSCN SNEGINPETS SHWIENVVKV RKPYTVTKQR EKWSEEEHDR FLEAIKLYGR GWRQIQEHIG TKTAVQIRSH AQKFFSKMAQ
101: EADSRSEGSV KAIVIPPPRP KRKPAHPYPR KSPVPYTQSP PPNLSAMEKG TKSPTSVLSS FGSEDQVNRC SSPNSCTSDI QSIGATSIDK KNNYTTSKQP
201: FKDDSDIGST PISSITLFGK IVLVAEESHK PSSYNDDDLK QMTCQENHYS GMLVDTNLSL GVWETFCTGS NAFGSVTEAS ENLEKSAEPI SSSWKRLSSL
301: EKQGSCNPVN ASGFRPYKRC LSEREVTSSL TLVASDEKKS QRARIC

Arabidopsis Description

RVE7Protein REVEILLE 7 [Source:UniProtKB/Swiss-Prot;Acc:B3H5A8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.