Factsheet for TraesCS7D01G540700.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G478200.1	Wheat	nucleus	95.45	95.45
TraesCS7A01G553800.1	Wheat	nucleus	93.37	88.61
HORVU7Hr1G121210.4	Barley	nucleus	88.2	86.76
Os06t0728700-01	Rice	nucleus	58.59	62.75
KXG20957	Sorghum	nucleus	54.66	60.83
Zm00001d014863_P002	Maize	nucleus	53.62	59.95
CDY26169	Canola	nucleus	20.91	32.17
Bra025914.1-P	Field mustard	nucleus	21.74	31.44
CDY19206	Canola	nucleus	22.57	30.11
AT3G10113.1	Thale cress	nucleus	20.91	30.06
TraesCS2D01G456900.1	Wheat	nucleus	25.47	29.57
AT1G18330.2	Thale cress	nucleus	22.36	29.03
TraesCS6D01G241900.1	Wheat	nucleus	26.92	28.95
KRH38938	Soybean	nucleus	25.88	26.82
KRH09476	Soybean	nucleus	26.29	26.62
TraesCS6D01G239800.1	Wheat	nucleus	14.49	24.48
TraesCS1D01G111400.1	Wheat	mitochondrion	11.18	24.43
TraesCS7D01G014900.2	Wheat	nucleus	14.29	24.38
TraesCS3D01G134000.1	Wheat	nucleus	13.46	21.81
TraesCS7D01G458000.1	Wheat	nucleus	15.11	21.41
TraesCS7D01G295400.1	Wheat	nucleus	24.02	15.53

Protein Annotations

EnsemblPlants:TraesCS7D01G540700.3	EnsemblPlantsGene:TraesCS7D01G540700	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	InterPro:SANT/Myb
PANTHER:PTHR12802	PANTHER:PTHR12802:SF86	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	TIGR:cd00167	TIGRFAMs:TIGR01557	MapMan:15.5.2.2	:	:

Description

No Description!

Coordinates

chr7D:-:630527242..630530005

Molecular Weight (calculated)

52441.8 Da

IEP (calculated)

6.335

GRAVY (calculated)

-0.748

Length

483 amino acids

Sequence
(BLAST)

001: MASMALAEER DALDSSRMPI GTGLSVDVAM EPNEEGMGEH PVKPRKPYTI TKQREKWTEE EHEKFLEALK LYGRSWRQIQ EHIGTKTAVQ IRSHAQKFFS
101: KVVREPGAKI EIEIPPPRPK RKPLHPYPRK RANSCNGANA ANGQSKLAHM SSSSGSDQEN GSPVSVISAM QSDAFGSSMS NPSSRSASPE SSDEENIVLP
201: MVNGGEGQQT GIDQSHKEAD QENKDTGTSE EDSSDEVQVT SVKLFGKTVV IPDPRKRCSP DTGSGHENRE QPSESSNKGT SQAPLAVDIP THTKGEQISQ
301: SSNKATSQAP LAVEVPTYTN GEQISEFSYK ATSQAPLAVE IQAYAAPPSG WVLPYNSFPL HFGESAEARI ARLHMWWPYY GFPMVHPSGP SAVAHNGKAT
401: DESEAAKSPP VESSSDFVDN TQATASKQWK VLESLGTAQA PPSVSNFQLK PSTNSAFVRV KPIVSSGDEP VRGFAPYKRC RVE

Best Arabidopsis Sequence Match ( AT5G37260.1 )
(BLAST)

001: MAMQERCESL CSDELISSSD AFYLKTRKPY TITKQREKWT EAEHEKFVEA LKLYGRAWRR IEEHVGTKTA VQIRSHAQKF FTKVARDFGV SSESIEIPPP
101: RPKRKPMHPY PRKLVIPDAK EMVYAELTGS KLIQDEDNRS PTSVLSAHGS DGLGSIGSNS PNSSSAELSS HTEESLSLEA ETKQSLKLFG KTFVVGDYNS
201: SMSCDDSEDG KKKLYSETQS LQCSSSTSEN AETEVVVSEF KRSERSAFSQ LKSSVTEMNN MRGFMPYKKR VKVEENIDNV KLSYPLW

Arabidopsis Description

RVE2Protein REVEILLE 2 [Source:UniProtKB/Swiss-Prot;Acc:F4K5X6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.