Factsheet for Os06t0728700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG20957	Sorghum	nucleus	63.19	65.67
Zm00001d014863_P002	Maize	nucleus	61.86	64.58
HORVU7Hr1G121210.4	Barley	nucleus	64.75	59.47
TraesCS7B01G478200.1	Wheat	nucleus	63.64	59.42
TraesCS7D01G540700.3	Wheat	nucleus	62.75	58.59
TraesCS7A01G553800.1	Wheat	nucleus	63.64	56.39
CDY26169	Canola	nucleus	23.28	33.44
Bra025914.1-P	Field mustard	nucleus	24.39	32.93
AT3G10113.1	Thale cress	nucleus	23.95	32.14
CDY19206	Canola	nucleus	25.06	31.22
AT1G18330.2	Thale cress	nucleus	25.5	30.91
KRH38938	Soybean	nucleus	29.71	28.76
Os05t0162800-00	Rice	mitochondrion, nucleus	13.08	28.64
KRH09476	Soybean	nucleus	30.16	28.51
Os04t0583900-01	Rice	nucleus	27.49	26.78
Os02t0685200-01	Rice	nucleus	28.82	26.48
Os02t0680700-01	Rice	nucleus	17.07	26.46
Os06t0105800-02	Rice	nucleus	16.41	24.83
Os01t0156000-01	Rice	nucleus	14.63	21.57
Os06t0669700-01	Rice	nucleus	11.53	21.05
Os08t0157600-01	Rice	nucleus	27.05	16.97

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	EntrezGene:4342135	EMBL:AK119632	ProteinID:BAD61826.1	ProteinID:BAD62104.1
ProteinID:BAF20559.1	ProteinID:BAS99625.1	ProteinID:EEE66394.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	EnsemblPlantsGene:Os06g0728700	EnsemblPlants:Os06t0728700-01
PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR12802	PANTHER:PTHR12802:SF86	UniProt:Q5Z5B9	InterPro:SANT/Myb
SMART:SM00717	SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI0000450682	RefSeq:XP_015644385.1	SEG:seg

Description

Homeodomain-like containing protein. (Os06t0728700-01)

Coordinates

chr6:-:31025972..31028984

Molecular Weight (calculated)

49489.1 Da

IEP (calculated)

4.983

GRAVY (calculated)

-0.773

Length

451 amino acids

Sequence
(BLAST)

001: MASMPQLEEK DSSDLAINKG PSLDLVKSPL MMNDASATVT AMQPNEGMEE FPVKVRKPYT ITKQREKWTE EEHDKFLEAL KLYGRSWRQI QEHIGTKTAV
101: QIRSHAQKFF SKVVREPGSN NAIEIPPPRP KRKPLHPYPR KCANSGSDAN PATAQLKLAP GSSSSGSDQE NGSPISVLSA MQSDAFGSSV SNPSTRCTSP
201: ASSDDGNNIP TFTSGEDNNV PCEPTVIDPS QSHKEIDQDR KDVNNMSEED SSEEEVQETS LKLFGRTVVI PDPRKRSSSD PKHESEEQIS QPSNEEMLQA
301: SSSVGEIPAA YCAPNGWFMS YNSFPFQFGE SAADARIPPL HVWWPYYGFA PISHPRGLST VMQQTEGSDE SDGVKSHSSE SSSDSGENVQ MTAPQSSRIV
401: ESLGAIYVRD SGSSFELKPS ANSAFVRVKP SNSGDEEVIR GFVPYKRCKF Q

Best Arabidopsis Sequence Match ( AT5G37260.1 )
(BLAST)

001: MAMQERCESL CSDELISSSD AFYLKTRKPY TITKQREKWT EAEHEKFVEA LKLYGRAWRR IEEHVGTKTA VQIRSHAQKF FTKVARDFGV SSESIEIPPP
101: RPKRKPMHPY PRKLVIPDAK EMVYAELTGS KLIQDEDNRS PTSVLSAHGS DGLGSIGSNS PNSSSAELSS HTEESLSLEA ETKQSLKLFG KTFVVGDYNS
201: SMSCDDSEDG KKKLYSETQS LQCSSSTSEN AETEVVVSEF KRSERSAFSQ LKSSVTEMNN MRGFMPYKKR VKVEENIDNV KLSYPLW

Arabidopsis Description

RVE2Protein REVEILLE 2 [Source:UniProtKB/Swiss-Prot;Acc:F4K5X6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.