Factsheet for Os02t0680700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG31009	Sorghum	nucleus	84.54	87.54
HORVU6Hr1G066000.1	Barley	nucleus	84.54	86.93
Zm00001d017609_P011	Maize	nucleus	80.76	86.08
TraesCS6D01G239800.1	Wheat	nucleus	84.54	86.01
TraesCS6B01G266800.3	Wheat	nucleus	84.19	85.66
HORVU0Hr1G031850.1	Barley	nucleus, plastid	84.54	73.87
TraesCS6A01G258600.2	Wheat	nucleus	83.85	71.34
GSMUA_Achr5P10280_001	Banana	nucleus	59.45	63.6
KRH08856	Soybean	nucleus	60.14	58.14
KRH35235	Soybean	nucleus	60.82	56.73
Os06t0669700-01	Rice	nucleus	48.11	56.68
Solyc06g036300.2.1	Tomato	nucleus, plastid	58.42	56.48
Bra029111.1-P	Field mustard	nucleus	61.51	55.94
CDY52837	Canola	nucleus	58.76	55.88
Bra003117.1-P	Field mustard	nucleus	58.42	55.56
CDY56155	Canola	nucleus	61.51	55.42
VIT_16s0050g01180.t01	Wine grape	nucleus	63.23	54.6
Os06t0105800-02	Rice	nucleus	54.64	53.36
PGSC0003DMT400074344	Potato	plastid	52.92	53.29
AT5G52660.2	Thale cress	nucleus	60.48	53.17
KRG91589	Soybean	nucleus	59.79	52.89
CDY27841	Canola	nucleus	51.2	52.1
CDY51831	Canola	vacuole	61.51	51.44
KRH38371	Soybean	nucleus	59.11	48.73
GSMUA_Achr1P03720_001	Banana	nucleus	56.36	47.67
Os05t0162800-00	Rice	mitochondrion, nucleus	25.77	36.41
Os01t0156000-01	Rice	nucleus	35.05	33.33
Os04t0583900-01	Rice	nucleus	27.49	17.28
Os06t0728700-01	Rice	nucleus	26.46	17.07
Os02t0685200-01	Rice	nucleus	25.09	14.87
Os08t0157600-01	Rice	nucleus	29.21	11.82

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.2	MapMan:27.1.6.2	EntrezGene:9272080	UniProt:B9F1T8	ProteinID:BAS80298.1
ProteinID:EEE57580.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR017930
InterPro:Myb_dom	InterPro:Myb_dom_plants	EnsemblPlantsGene:Os02g0680700	EnsemblPlants:Os02t0680700-01	PFAM:PF00249	PFscan:PS51294
PANTHER:PTHR12802	PANTHER:PTHR12802:SF83	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	TIGRFAMs:TIGR01557
UniParc:UPI00019332CC	RefSeq:XP_015627665.1	SEG:seg	:	:	:

Description

Similar to DNA binding protein. (Os02t0680700-01)

Coordinates

chr2:-:27776483..27781443

Molecular Weight (calculated)

31836.6 Da

IEP (calculated)

9.248

GRAVY (calculated)

-0.569

Length

291 amino acids

Sequence
(BLAST)

001: MVSANQPPPD AAAAAAGSAG EDASKKVRKP YTITKSRESW TEQEHDKFLE ALQLFDRDWK KIEAFVGSKT VIQIRSHAQK YFLKVQKNGT SEHVPPPRPK
101: RKAAHPYPQK ASKNEPGYTI KADSSSMLRN SGMNATVSSW THNSIPPIVA SSMVKEDLGA GAMAPNNFCS SSTEGPARAW QPGETNDQIN QVPSLRLMPD
201: FAQVYSFLGS VFDPSTSGHL QKLKEMNPID VETALLLMRN LSINLTSPDF EDQKKLLSSY STPSDGLELG STRSSVLADR PLSAPFMIKG E

Best Arabidopsis Sequence Match ( AT5G52660.1 )
(BLAST)

001: MVSRNSDGYF LDPTGMTVPG LGPSFTAAVS SSSSPTTSST AVAVADVTAM VSSSEEDLSK KIRKPYTITK SRESWTEPEH DKFLEALQLF DRDWKKIEAF
101: IGSKTVIQIR SHAQKYFLKV QKSGTGEHLP PPRPKRKAAH PYPQKAHKNV QLQVPGSFKS TSEPNDPSFM FRPESSSMLM TSPTTAAAAP WTNNAQTISF
201: TPLPKGAGAN NNCSSSSENT PRPRSNRDAR DHGNVGHSLR VLPDFAQVYG FIGSVFDPYA SNHLQKLKKM DPIDVETVLL LMRNLSINLS SPDFEDHRRL
301: LSSYDIGSET ATDHGGVNKT LNKDPPEIST

Arabidopsis Description

RVE6Protein REVEILLE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0W3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.